Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1625 ATGCTCAGCGACGTTATCGGGAACGGCATCTCCGGCATCCTTCACAAGTGGGTGAACTACGGGCGCGGGTGGCGCCCCCGCTGGTTCGTCCTCCACGACGGCGTGCTTTCCTACTACAAGATCCACGGCCCCGACAAGCTCGTCCTCAATCGCGAGGTCGAGAACGGCTCCATGGTCATCGGCGAGGAGTCCCTCCGCCGCATCAATAGCCACCGCCACTGCCCCTCCCGCGACCGCAAACCCGTCAGCGAAATCCATCTTATGGTGTGTTCGGTGCGAGAGAATAGGTCAGATAAGAGGAGGTTTTCTGTGTGGACGGGGACGAAGAAGAGGCTGCATTTGAGGGCGGAGAGCAAGGAAGATAGAGCAATGTGGGTGGATGCAATGATGGCAGTGAAGGACATGTATCCTCGCATGCCCAGTGCAGAGATTTTCTCACCCATGGCATCAGTGGCTATTTCCACTGATAAGTTGAGAGAGAGGATTTTAGAAGAGGGTGTGAGTGAAGCTACAATCTGGGAATGCGAGGAAATCATGAAATTCGAGTTCGCTCAGTTGAAGAAGCAAATGGTGGCTCTCAAGCACAAGCATTTGCTACTAATGGACACGTTACGCCAGTTAGAGTCGGAGAAAGTTGATTTGGAGAACACACTTATCGAAAGCCAGAGAAAATCAAAGGATGGAGCAGATACCCATCCATCAATGCAAGAAAAATATAGCGAGGGAAGTGGGGATGACTCTTCTGATGAGAACGATAGGCTCGATGCTTCAGATGATGACGACGAGGCATTCTTTGATTCATATGATTTTCTATCAACAGACTCTGATCCCGTGAGATCCTGCCATGATTCTGAGCAGGATGAGACTGGTCCAAATGAGAAATGTGATGAAAAGGCACCCGGATCTGTAGGATTTAACTATCCTCATATCAAGCGACGAAAGAGGTTGCCCGATCCTACTGAGAAAGAAAGTAGCGTCAGTCTATGGTCAATCATAAAAGATAATATCGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTTAACGAGCCTCTCTCCTCACTGCAGAAATGTTTTGAAGATGTTGAGTACTCTTACCTTCTAGACCAAGCTTATGAATGGGGCAAAATGGGTGATGGTGTGAAGAGGATGGTGTATGTAGCTGGATTTGCAGCTTCGGCATATGCTAGCACCAAAGGTAGAAGTTGCAAACCTTTTAATCCACTGTTGGGAGAGACATATGAAGCAGATTACCCAGACAAAGGCATTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGGTTGTAGCATGCCATTGTGAGGGAAGGGGCTGGAAATTCTGGGGTGACGTCAGTTTAAAAAGTAAATTTTGGGGTCGTTCAATCCAGCTTGACCCTGTTGGTGTATTGACAGTGGAATTTGATGATGGAGAAATTATTCATTGGAGCAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAACTCTACTGCGACCATTATGGTACAATGCGCCTAGAGGGGAACAGTGACTATTTATGTAAGATCAAATTCAAGGAGCAGTCAATCATTGATAGGAACCCTCACCAGATTCACGGCATAGTGGAAGATAAGAAAGGTAGAACAGTAGCAACTCTAATTGGGAAGTGGGATGAAAGTTTGCACTACGCAATTGGGGGGAGTTTTGGGAAAGGAAAAGGGTCCAATGAGTCATCAAAACCACATCTTCTGTGGAAGAGGAGCCCGCCACCGGAGTACCAGACAAGATATAACTTCACACAATTTGCTATTACACTCAATGAAATCACACCTGGACTAAAGGAGAAGTTGCCACCGACAGATTCAAGGCTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAGCATGAAATGGCCAATTCTGAAAAGTTGCGACTGGAACAAAGACAGCGGCAGGCACGAAAGATGCAAGAAAAGGGTTGGAAACCAAGGTGGTTTGCTAAGGAAAAAGGCAGCAGCTCTTACCGTTATACTGGAGGGTACTGGGAGAGTAGGGAAAAGGGGAACTGGGAATCCTGTCCTGACATTTTTGGTCAAGTCTCAACCGATACTGATGTTAACCCAAATCCATAA 2121 0.4677 MLSDVIGNGISGILHKWVNYGRGWRPRWFVLHDGVLSYYKIHGPDKLVLNREVENGSMVIGEESLRRINSHRHCPSRDRKPVSEIHLMVCSVRENRSDKRRFSVWTGTKKRLHLRAESKEDRAMWVDAMMAVKDMYPRMPSAEIFSPMASVAISTDKLRERILEEGVSEATIWECEEIMKFEFAQLKKQMVALKHKHLLLMDTLRQLESEKVDLENTLIESQRKSKDGADTHPSMQEKYSEGSGDDSSDENDRLDASDDDDEAFFDSYDFLSTDSDPVRSCHDSEQDETGPNEKCDEKAPGSVGFNYPHIKRRKRLPDPTEKESSVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDVEYSYLLDQAYEWGKMGDGVKRMVYVAGFAASAYASTKGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMVVACHCEGRGWKFWGDVSLKSKFWGRSIQLDPVGVLTVEFDDGEIIHWSKVTTSIYNLILGKLYCDHYGTMRLEGNSDYLCKIKFKEQSIIDRNPHQIHGIVEDKKGRTVATLIGKWDESLHYAIGGSFGKGKGSNESSKPHLLWKRSPPPEYQTRYNFTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANSEKLRLEQRQRQARKMQEKGWKPRWFAKEKGSSSYRYTGGYWESREKGNWESCPDIFGQVSTDTDVNPNP* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1625 706 SUPERFAMILY Oxysterol-binding protein-like 322 695 IPR037239 -
Pvu9g1625 706 MobiDBLite consensus disorder prediction 275 319 - -
Pvu9g1625 706 Gene3D - 413 590 - -
Pvu9g1625 706 Pfam Oxysterol-binding protein 327 682 IPR000648 GO:0008289
Pvu9g1625 706 Coils Coil 197 224 - -
Pvu9g1625 706 Pfam Pleckstrin homology domain 15 129 - -
Pvu9g1625 706 Gene3D - 624 696 - -
Pvu9g1625 706 MobiDBLite consensus disorder prediction 218 234 - -
Pvu9g1625 706 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 698 IPR000648 GO:0008289
Pvu9g1625 706 SUPERFAMILY PH domain-like 10 146 - -
Pvu9g1625 706 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 1 698 - -
Pvu9g1625 706 MobiDBLite consensus disorder prediction 276 295 - -
Pvu9g1625 706 MobiDBLite consensus disorder prediction 218 258 - -
Pvu9g1625 706 SMART PH_update 8 136 IPR001849 -
Pvu9g1625 706 ProSiteProfiles PH domain profile. 7 134 IPR001849 -
Pvu9g1625 706 Coils Coil 635 655 - -
Pvu9g1625 706 Gene3D - 8 136 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1625 Pvu-Chr9 22855418 22862286 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1625 K20456 - gmx:100807703 1185.24