Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1622 ATGGCAGGGGGTTCAAATTCAAAGAGGCCTCATCATGTCAACAGGGCCACTGATTCCACAAACACACAACAGGGCATAATTGAAGGGAATAATCTGCAACCACAAACACAAGTGCAAGAACGAGTTACTGTTTTCGACCAACATTTCTATGATGGAATCCCATGCTTTGCCGATGTTTGCTTTCTCCACAAGTCAAGATCAATCTCAAAGGTCTCAGAGGTGAGTTTACACTTGGGCAGAGCTGGAAGTATTGGATGTGGAATGGTTTTGGATACCATTGGGAGCAGCATTACAAGTCTAAATGCTGGCAATGGGTTTGCTTCTGGAGCTGCGATTAAGGGGAATGGAATTTCAATTTTAGCATTTGAGGTTGCAAACACAATTGTCAAAGGTTTTAATCTTCTGGAATCTCTGTCCGCAGAAAGTATTAGGCATTTAAAAGAAAAGGTGCTTCTTTCAAAGGGTGTGCAGAATTTAATATCAGAAGATATGAATGAACTTCTTAGGATTGTTGCAGCAGACAAGAGGCAGGAGTTGAAAGTTTTTTCTAATGAGGTGATTCGTTTTGGAAATCGTTCGAAGGATCCTCAGTGGCACAATTTAGACCGTTACTTAGAGAAAATTAACAGACAATTAAATGGAAGACTGTCAAGAGACGAGGCAGAATCAACAACGCAACGCTTGATGACTTTGGTTCATTTTACAGTTAAATTGTACCATGAATTAGATGCTTGGGATAAACTTCAACAAGATTTTCAACGTGATGATGACCTTGCAGTCTTGACGGCGGAAATTAAAAATCGAAAGAAGCAAATTAGTCATTTAAAGAAAAAATCACTCTGGTCTAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGATATTGTCCTTTTTTTGCATTTGGAGATAATCAATGTCTTTGGCAATACAGATGATCACGAACCATCAATTGGACACATGAGCAATTGCCAAAGATTGGGCCCTGCAGGCCTTGCTTTGCATTATGCAAATATAGTGCGTCAAATCGATACTCTTGTAACCAAATCAACCATGTCTGCTGCAAATACAAAGGATTCACTCTATCAAAGCTTGCCTCCTAATATAAAATTAGCTCTACGTTCTAAATTACCATCCTTTCATGCTGTAGAAGAGCAAAGTGTAGCCGATATAAAAAGTGAGATGAATAAAACCTTACGTTGGTTGGTTCCCATGGCCACTAAGACATCCAAAGCACATCATAGATTTGGTTGGCTTGGGCAGTGGGCAAACACAAGGTATGAGGTAAACAGGAAGGGTGGTGTAATGTGGAATGAGACATTCCACCATGCAGATAAAGATAAAGTGGACCATTATATTCTTGAACTTCTCTTATGGCTTCATCGCTTGGCCATCAGACGTAAGACAGACTGTGATGCTATTGCTGGCTAA 1428 0.4006 MAGGSNSKRPHHVNRATDSTNTQQGIIEGNNLQPQTQVQERVTVFDQHFYDGIPCFADVCFLHKSRSISKVSEVSLHLGRAGSIGCGMVLDTIGSSITSLNAGNGFASGAAIKGNGISILAFEVANTIVKGFNLLESLSAESIRHLKEKVLLSKGVQNLISEDMNELLRIVAADKRQELKVFSNEVIRFGNRSKDPQWHNLDRYLEKINRQLNGRLSRDEAESTTQRLMTLVHFTVKLYHELDAWDKLQQDFQRDDDLAVLTAEIKNRKKQISHLKKKSLWSRSLEEVMEKLVDIVLFLHLEIINVFGNTDDHEPSIGHMSNCQRLGPAGLALHYANIVRQIDTLVTKSTMSAANTKDSLYQSLPPNIKLALRSKLPSFHAVEEQSVADIKSEMNKTLRWLVPMATKTSKAHHRFGWLGQWANTRYEVNRKGGVMWNETFHHADKDKVDHYILELLLWLHRLAIRRKTDCDAIAG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1622 475 Coils Coil 258 278 - -
Pvu9g1622 475 PANTHER OS01G0873900 PROTEIN 9 472 IPR045021 GO:0045927
Pvu9g1622 475 Pfam Domain of unknown function (DUF3475) 119 175 IPR021864 GO:0045927
Pvu9g1622 475 MobiDBLite consensus disorder prediction 16 33 - -
Pvu9g1622 475 MobiDBLite consensus disorder prediction 1 33 - -
Pvu9g1622 475 PANTHER DUF668 FAMILY PROTEIN 9 472 - -
Pvu9g1622 475 Pfam Protein of unknown function (DUF668) 325 409 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1622 Pvu-Chr9 22811298 22817716 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1622 - - pvu:PHAVU_009G157000g 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2850 2 44116595 44124701 Pvu9g1622 9 22811298 22817716 PCT