Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1616 ATGCGTTTCGCGTTTCACACGATGAGGAAGTTTGTCACCATCTTCTCCCTTTTCAAATCTAAGAACTTCTCCGTTTCGCTAATTCCAAATTCTCCACGCTGTTCCAATCAACTCCACCCTAATTTCAGAAACCTCACGCAGATTTGCGATTTATCACTCTCACCTCTCTCTTCGCATCGATTTGTCTCCACTACCGCGGAGAATCCTTCCACATTGAATAGGAATGTTCATCAGGACCAGGGCATTGATTTTCCTGGAGGAACAGTAGAACTCATCCCTGAAATGAAGTTTATATCAGAATCAGTTAAAGAGAGAATACCCTGCTACCGTGTCCTTGATGATAATGGGCAGGCGATCATGGGTCATAATTTTGTGCAGGTCAGCGAGGAAGTTGCTGTTAAGATGTACACTGACATGGTTACTCTCCGATCTATGGATACTATCTTCTATGAAGCACAAAGACAAGGTAGAATATCGTTTTATGTGACGGCAATAGGAGAGGAGGCTATTAATGTTGCTTCAGCTGCTGCTCTTTCCATGGACGATGTTGTTTTCCCTCAGTATAGGGAAGCGGGAGTCTTGTTATGGCGTGGTTTTACTCTGCAAGAATTTGCAAACCAGTTATTTTCCAATAAATATGATAATGGGAAAGGAAGGCAGATGCCAGCTCATTATGGTTCCAACAAACATAATTACTTTACAATAGCATCAACTATTGCTACACAAATTCCCCATGCTGTTGGAGCTGCTTATTCCTTAAAGATGGATAAGAAGGATGCATGCGCTGTAACTTACTTTGGTGATGGTGGATCTAGTGAGGGAGATTTCCATGCTGCTTTAAATTTTGCAGCGGTTACAGAGGCCCCAGTTATTTTTATATGCCGGAACAATGGATGGGCTATTAGTACCCCCATTTCAGATCAGTTTCGAAGTGATGGTGTAGTCGTGAAAGGACAATCATATGGAGTCCGTAGCATCCGCGTAGATGGCAATGATGCCCTGGCCATCTACAGTGCTGTTCAAACTGCTCGTCAAATGGCAATTACTGAAGAGAGACCAATTCTAATAGAAGCTCTTACGTACAGAGTGGGACACCATAGCACATCAGATGACTCCACCAAGTATCGTCCCGCAAATGAGATTGAATGGTGGAGAGTGGCACGTGATCCTGTGGCTAGATTTAGAAAGTGGCTAGAAAATAATGGTTGGTGGAATGATCGGGCAGAGTCAGAGCTTATAAACAATTTGAGACAGCAGGTTATAGACATAATGTTGATACTAGAATCCATACTAATACATCACAGTGTCTAA 1311 0.4272 MRFAFHTMRKFVTIFSLFKSKNFSVSLIPNSPRCSNQLHPNFRNLTQICDLSLSPLSSHRFVSTTAENPSTLNRNVHQDQGIDFPGGTVELIPEMKFISESVKERIPCYRVLDDNGQAIMGHNFVQVSEEVAVKMYTDMVTLRSMDTIFYEAQRQGRISFYVTAIGEEAINVASAAALSMDDVVFPQYREAGVLLWRGFTLQEFANQLFSNKYDNGKGRQMPAHYGSNKHNYFTIASTIATQIPHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVTEAPVIFICRNNGWAISTPISDQFRSDGVVVKGQSYGVRSIRVDGNDALAIYSAVQTARQMAITEERPILIEALTYRVGHHSTSDDSTKYRPANEIEWWRVARDPVARFRKWLENNGWWNDRAESELINNLRQQVIDIMLILESILIHHSV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1616 436 Pfam Dehydrogenase E1 component 138 423 IPR001017 GO:0016624
Pvu9g1616 436 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 57 424 - -
Pvu9g1616 436 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 106 424 IPR029061 -
Pvu9g1616 436 Gene3D - 77 428 - -
Pvu9g1616 436 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 57 424 - -
Pvu9g1616 436 CDD TPP_E1_PDC_ADC_BCADC 135 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1616 Pvu-Chr9 22695635 22703454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1616 52 312 Acyl Lipid Metabolism Gene Families AT5G09300 74.812 5.13e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1616 K00166 - gmx:100779198 701.819