Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1606 ATGTCTCCTAACCTAATGGAATTAAGTGCTTCCACTCTAGTTCTGTACCCTGCATCACAGTCAGAAGAGTCCAAAAAAGAGAATGGAGTGCTAGCTTTTGAGTCAAATTTTCCTCAAATGAAAGGGGAAATGCCCAAAGAGTTCTTTTGGCCTTCTGGAGATTTGATTAAGGCCACACAAGAAGAGTTGAAGGAACCCCTTGTGAACTTAGGAATCATGAAAAATGGTGATGAGAAAGCAATTGCCAATGCTGCAGAGCTTGTGAGACATGCCTGCTTGAAGCATGGCTTCTTCCAAGTGATCAACCATGGTGTCAACCCAGATCTCATAGATGCTGCTTACCATCAAATTGACACCCTTTTCAACCTCCCTATCAGCCAAAAACTCACTGCTAAGAGAAAACCTGGTGCACTCTCTGGCTACTCTGGTGCTCATGCAGATCGTTTCTCCTCCAAATTGCCATGGAAAGAGACATTTTCTTTCCTCTTCCATCACCAAGGCTTCTCCAATTCCCAGATTGTTGACTACTTTGAATCTGTCTTAGGCCAGGACCTTCAACACACAGGGAGGGTGTATGAAGAATACTGTGAAGCAATGAAGGAGTTATCTTCAGTAATAATGGAGCTGTTGGGAATAAGTTTGGGAGTGGATGGTTTGCATTATCAAAGATTTTTTGAAGATGGAGTGTCAATAATGAGGTGCAACTATTATCCACCTTGCAACAGTGCGAACCACACATTTGGAACTGGCCCTCACACTGATCCAACCTCACTCACAATTCTTCATCAAGACCAAGTTGGAGGCTTAGAAGTTTTTGTTGATAACAAATGGCATGCTGTTCGCCCTCGTGCTGAAGCCTTTGTCGTAAACATTGGTGACACTTTCATGGCACTGTCAAATGGGAGATACAAGAGTTGTGTCCACAGGGCAGTGGTGAACAGATTGAGAGAGAGAAGATCAATGGCTTACTTTGTGTGTCCAAGAGAGGACAAAGTGGTGAAGCCCCCAGAGATTCTGACAAGCAAAAATGAGGAAAGAAAGTACCCTGATTTTACATGGTCCAATTTGCGTGAATTCACACAGAATCACTATAGGGCTGATGCTGCTACACTCCAAAGCTTCCTTCAGTGGCAAACATCTTCCAACTCCTCCAACTTCTAG 1161 0.4367 MSPNLMELSASTLVLYPASQSEESKKENGVLAFESNFPQMKGEMPKEFFWPSGDLIKATQEELKEPLVNLGIMKNGDEKAIANAAELVRHACLKHGFFQVINHGVNPDLIDAAYHQIDTLFNLPISQKLTAKRKPGALSGYSGAHADRFSSKLPWKETFSFLFHHQGFSNSQIVDYFESVLGQDLQHTGRVYEEYCEAMKELSSVIMELLGISLGVDGLHYQRFFEDGVSIMRCNYYPPCNSANHTFGTGPHTDPTSLTILHQDQVGGLEVFVDNKWHAVRPRAEAFVVNIGDTFMALSNGRYKSCVHRAVVNRLRERRSMAYFVCPREDKVVKPPEILTSKNEERKYPDFTWSNLREFTQNHYRADAATLQSFLQWQTSSNSSNF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1606 386 Pfam non-haem dioxygenase in morphine synthesis N-terminal 66 164 IPR026992 -
Pvu9g1606 386 Pfam 2OG-Fe(II) oxygenase superfamily 230 327 IPR044861 -
Pvu9g1606 386 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 24 381 - -
Pvu9g1606 386 Gene3D - 37 365 IPR027443 -
Pvu9g1606 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 327 IPR005123 -
Pvu9g1606 386 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 24 381 - -
Pvu9g1606 386 PRINTS Isopenicillin N synthase signature 88 105 - -
Pvu9g1606 386 PRINTS Isopenicillin N synthase signature 252 273 - -
Pvu9g1606 386 PRINTS Isopenicillin N synthase signature 287 313 - -
Pvu9g1606 386 SUPERFAMILY Clavaminate synthase-like 42 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1606 Pvu-Chr9 22617152 22620144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1606 43 365 Glycosyltransferase AT5G59530 27.219 1.23e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1606 K05282 - gmx:100816834 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1606 9 22617152 22620144 Pvu9g1606 9 22617152 22620144 ECH