Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1601 GTGGAGAAGAACATACAATTTCGGCTAATCTCTAGCGTCATAGAATTCCATAACCAGTGTAGGAATGCTGTGTGGCTCCCTGGATCACTATCAGAAGCAGTTGTGACCACCAATACGTGCAATATCTGTTCTCCTGGTCCTGTTTACTTAATTCAGTTCAAGTTTAGGCAGCTGGAAATTCCGCCAAACTACAGTGTCAACCATTTGGGTTGCATTGGTGGCTGTGACGAGATTCTTTCACAGTTGACAGAAATATGTGGCAGGGGATCTCGCATGCCAGCAAGACCTCGAGGACCAACTGCACCAACGAGCAATGCCCATCATACTAACCCACGACAACCAACTGCACCAACGAGCAATGGCCTTCATACTAACCCACGACAAAGACGTTGTATGAACTGTCAAGAAACAGGACATTCTTCTAATGATTGTCCTTTACGCTCTGGGAATGTCCGACATCGTGGAGCAAGTGAACATAACGGGGAAGCTTCTGTTTCATGCAGTTCGTGTGGAACACCATGTGTTTTGAGAACTGCAAATACAGCAACTAACAGGGGAAGGAAGTTCTATTCATGTCAATCACAGGAATGCAACTTCTTTGTATGGGAGGATAGCCTCGATGATGGAACTGGAGGCAGAAGTGCCACACGTTCAAATAGTATTCCATCCTCCAATCCTAGGCGAACAGGTGGACGCGGATCTCGTGGTAGAGGTGGCCAGACAGGAGCTCATACTGCTGCCACAACATTTGTTTCGGCAACAGGAGATCCTATTTCTGGTAGAAGGTGCTATAGGTGTGGTGATCCATCTCACTTTGCAAATGTCTGCCCCAATCGTGGTGTCTGA 846 0.4704 VEKNIQFRLISSVIEFHNQCRNAVWLPGSLSEAVVTTNTCNICSPGPVYLIQFKFRQLEIPPNYSVNHLGCIGGCDEILSQLTEICGRGSRMPARPRGPTAPTSNAHHTNPRQPTAPTSNGLHTNPRQRRCMNCQETGHSSNDCPLRSGNVRHRGASEHNGEASVSCSSCGTPCVLRTANTATNRGRKFYSCQSQECNFFVWEDSLDDGTGGRSATRSNSIPSSNPRRTGGRGSRGRGGQTGAHTAATTFVSATGDPISGRRCYRCGDPSHFANVCPNRGV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1601 281 PANTHER OS07G0190500 PROTEIN 107 215 - -
Pvu9g1601 281 ProSiteProfiles Zinc finger CCHC-type profile. 261 278 IPR001878 GO:0003676|GO:0008270
Pvu9g1601 281 Pfam Zinc knuckle 130 145 IPR001878 GO:0003676|GO:0008270
Pvu9g1601 281 Pfam GRF zinc finger 166 205 IPR010666 GO:0008270
Pvu9g1601 281 MobiDBLite consensus disorder prediction 102 127 - -
Pvu9g1601 281 Gene3D - 123 154 - -
Pvu9g1601 281 Gene3D - 222 281 - -
Pvu9g1601 281 MobiDBLite consensus disorder prediction 211 230 - -
Pvu9g1601 281 ProSiteProfiles Zinc finger CCHC-type profile. 129 145 IPR001878 GO:0003676|GO:0008270
Pvu9g1601 281 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Pvu9g1601 281 SMART c2hcfinal6 130 146 IPR001878 GO:0003676|GO:0008270
Pvu9g1601 281 SUPERFAMILY Retrovirus zinc finger-like domains 114 152 IPR036875 GO:0003676|GO:0008270
Pvu9g1601 281 MobiDBLite consensus disorder prediction 89 127 - -
Pvu9g1601 281 MobiDBLite consensus disorder prediction 208 246 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1601 K03165 - pvu:PHAVU_009G154900g 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1601 9 22492177 22499197 Pvu9g1601 9 22492177 22499197 ECH