Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1595 ATGCGCATGGTTGATGGGTTGTTCTCTCCACCACACAAACACCATGCCTTTGTCTTTCTCTCTCAATACATTGTTAAACCAATGGGTGGAAATTGGCACTTAGCAAGAAGAGGTCAAATACTTGTATCATTTAAAGGTGTGAGGCTTGTACACACAACGTGCCGAATCTCTGTCCCTAGGACCTTCCCAAGAAATGAAGAAAAGACCTTTTCTAATATCTCAAGGGATAAGAAGACAGTTCCAGAAGCAGATCCTCCCAGTATCAAAGATGTTCATCTTTTGTATGAATTTTTGGACCAGAGTACCAAGCTCACGGTATTGACTGGAGCTGGAATCAGTACAGAGTGTGGCATCCCCGACTACAGAAGCCCCAATGGAGCTTATAGTTCTGGTTTCAAACCGATAACCCATCAGGAGTTTCTCCGTTCGAGTCGAGCTCGGAGGAGATATTGGGCAAGGAGCTATGCTGGATGGATACGATTTACAGCGGCACAACCATCTGCTGCCCATACTGCTTTGGCAACATTAGATAAAGCTGGCCGAATTGATTTTATGATTACCCAAAATGTTGATAGGCTGCATCATCGTGCTGGTAGCAACCCATTAGAAATACATGGGACTGTATACACTGTAATTTGTATAGATTGTGGATATTCCTTTTGCCGGAGCTTATTTCAAGACCAGTTGAAAGCCCTTAATCCAAAGTGGGCAGAAGCAATTGATAACTTGGACAATGGAAACCCTGGATCAGATAAGAGCTTTGGCATGAAACAAAGACCTGATGGTGATATTGAGATTGATGAAAGATTTTGGGAGGAGGATTTTATAATCCCAACTTGTCATAAGTGCAATGGAGTTCTCAAACCTGATGTTGTCTTCTTTGGTGATAATGTTCCTAAGGACAGAGCTGATATGGCAATGGAAGCGTCCAGAAGATGTGATGCTTTTCTGGTACTTGGGTCGTCTGTGATGACCATGTCTGCTTTTCGACTTGTCAGGGCAGCTCACGAGGCTGGTGCTGCTACTGCAATTGTGAACGTAGGTATGACGCGTGCTGATGATTTTGTGCCCTTGAAAATCAATGCACGATTGGGTGAGATCCTGCCAAGAGTACTTGACATGGGATCTATAAGCATACCTGCTGTTTAA 1149 0.4369 MRMVDGLFSPPHKHHAFVFLSQYIVKPMGGNWHLARRGQILVSFKGVRLVHTTCRISVPRTFPRNEEKTFSNISRDKKTVPEADPPSIKDVHLLYEFLDQSTKLTVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQEFLRSSRARRRYWARSYAGWIRFTAAQPSAAHTALATLDKAGRIDFMITQNVDRLHHRAGSNPLEIHGTVYTVICIDCGYSFCRSLFQDQLKALNPKWAEAIDNLDNGNPGSDKSFGMKQRPDGDIEIDERFWEEDFIIPTCHKCNGVLKPDVVFFGDNVPKDRADMAMEASRRCDAFLVLGSSVMTMSAFRLVRAAHEAGAATAIVNVGMTRADDFVPLKINARLGEILPRVLDMGSISIPAV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1595 382 SUPERFAMILY DHS-like NAD/FAD-binding domain 76 374 IPR029035 -
Pvu9g1595 382 Pfam Sir2 family 109 324 IPR003000 GO:0070403
Pvu9g1595 382 PANTHER NAD-DEPENDENT PROTEIN LIPOAMIDASE SIRTUIN-4 68 373 - -
Pvu9g1595 382 Gene3D SIR2/SIRT2 'Small Domain' 119 297 IPR026591 -
Pvu9g1595 382 CDD SIRT4 94 368 - -
Pvu9g1595 382 Hamap NAD-dependent protein deacetylase [cobB]. 85 371 IPR026587 GO:0034979|GO:0051287
Pvu9g1595 382 Gene3D - 100 366 - -
Pvu9g1595 382 ProSiteProfiles Sirtuin catalytic domain profile. 92 380 IPR026590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1595 Pvu-Chr9 22404657 22411889 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1595 K11414 - gmx:100815194 667.537