Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1588 ATGGTACAAAATGTTTCGACAACAAATGTTAGCTTCCGTCGAGGTTATGACATCGAGGAGGACTCCATAGATGGGGCTCCTTTAAAAAGTGACCCTGAATACTACGATGACGATGGTCGTCTTAAACGAACAGGGAATGTTTGGACTACAAGCTCCCACATTATCACAGCTGTGGTAGGATCTGGGGTGCTCTCCTTAGCTTGGGCAATAGCTCAGATGGGTTGGATTGCTGGTCCTTCAGTGATGATCTTATTCAGCATTGTCACTTTGTATACTTCGTCCTTTCTAGCTGATTGTTATCGTTCTGGTGACCCAATGTTCGGGAAGAGAAATTATACTTTCATGGACGCAGTTAGCACCATTCTGGGTGGGCACAGTGTTACGTTTTGCGGGATTGTTCAATACTTGAACCTTTTCGGAAGTGCAGTAGGATACACAATTGCGGCTTCACTTAGCATGATGGCACTTAAAAGGTCTCACTGTATTCATTCCTCTGATGGAGAAAACCCGTGTCATATTTCAAGTAGCCCATACATGATCGGTTTTGGGGCAATGCAAATTTTCTTTTCTCAAATTCCAGATTTTCATAACATGTGGTGGCTCTCAATAGTGGCTGCAGTCATGTCTTTCACCTATTCCATAATTGGTCTCGTTCTTGGAATTGTCAAAATTACGGAAACCGGAACTTTCAAGGGAAGCCTCACTGGAATAAGCATTGGAACTGTGACTGAGGCCCAAAAAGTATGGGGAGTTTTCCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCTTTCGTTCTCCTTGAAATTCAGGATACCATCAAATCGCTTCCATCCGAAGTAAAAACAATGAAAAAGGCTGCAAAGTTAAGCATTGCAGTGACCACAACATTTTATATGCTTTGTGGCTGCATAGGATATGCTGCTTTTGGAGATTTAGCACCTGGGAACCTGCTTGCTGGATTTGGTTTCCATAAACTATTTTGGCTTGTAGATATGGCTAATGCTGCTATCGTAATTCACCTTGTGGGGGCTTACCAAGTGTATGCCCAACCCCTCTTTGCCTTCGTGGAGAAGGAGACAGCAAAAAGATGGCCAAAAACTAACAAGGAATTCAAAATTTCAGTTCCTGGTTTGCCGCCCTACAATCAGAACATATTTAGCCTAGTCTGGAGGACAGTGTTTGTGATCATAACAACTGTTATATCAATGATGCTTCCATTCTTCAACGACGTTTTGGGAGTGATTGGTGCATTGGGGTTTTGGCCTTTAACTGTCTACTTTCCTGTGGAGATGTATATATTGCAAAAGAGGATTCCAAAATGGAGCATGAGATGGATTTCGCTGAAGTTGATGAGTGCAGTCTGCCTCATTGTATCAATTGTGGCTGGTCTTGGCTCTGTGGTCGGTGTCTTGCTTGACCTCAAGAAATACAAGCCATTCAGTTCAGATTATTAA 1461 0.4271 MVQNVSTTNVSFRRGYDIEEDSIDGAPLKSDPEYYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPSVMILFSIVTLYTSSFLADCYRSGDPMFGKRNYTFMDAVSTILGGHSVTFCGIVQYLNLFGSAVGYTIAASLSMMALKRSHCIHSSDGENPCHISSSPYMIGFGAMQIFFSQIPDFHNMWWLSIVAAVMSFTYSIIGLVLGIVKITETGTFKGSLTGISIGTVTEAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSLPSEVKTMKKAAKLSIAVTTTFYMLCGCIGYAAFGDLAPGNLLAGFGFHKLFWLVDMANAAIVIHLVGAYQVYAQPLFAFVEKETAKRWPKTNKEFKISVPGLPPYNQNIFSLVWRTVFVIITTVISMMLPFFNDVLGVIGALGFWPLTVYFPVEMYILQKRIPKWSMRWISLKLMSAVCLIVSIVAGLGSVVGVLLDLKKYKPFSSDY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1588 486 PANTHER OS05G0424000 PROTEIN-RELATED 5 479 - -
Pvu9g1588 486 Pfam Transmembrane amino acid transporter protein 44 473 IPR013057 -
Pvu9g1588 486 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1588 Pvu-Chr9 22308211 22315646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1588 22 486 Organic Solute Cotransporters AT5G09220 67.804 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1588 K24917 - gmx:100817699 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1588 9 22308211 22315646 Pvu9g1588 9 22308211 22315646 ECH