Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1584 ATGGCGAGCACCAAAGTTCAGAGGGTTATGACTCAGCCCATTAACTTGATTTTTAGGTTTCTTCAGAGCAAAGCACGCATTCAGATTTGGCTTTTTGAGCAAAAGGATTTGAAGATTGAAGGCCGAATCATTGGTTTTGATGAATACATGAATTTGGTTCTTGATGATGCTGAAGAAGTGAACATCAAAAAGAAAAGCAGAAAGACCTTAGGGAGGATCCTTCTTAAAGGAGACAACATAACCTTGATGATGAGCACGGGGAAATGA 267 0.397 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLKIEGRIIGFDEYMNLVLDDAEEVNIKKKSRKTLGRILLKGDNITLMMSTGK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1584 88 Gene3D - 1 86 - -
Pvu9g1584 88 Pfam LSM domain 20 83 IPR001163 -
Pvu9g1584 88 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN E 1 87 IPR027078 GO:0000398|GO:0005681
Pvu9g1584 88 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN E 1 87 - -
Pvu9g1584 88 CDD Sm_E 7 85 IPR027078 GO:0000398|GO:0005681
Pvu9g1584 88 SUPERFAMILY Sm-like ribonucleoproteins 12 86 IPR010920 -
Pvu9g1584 88 SMART Sm3 19 85 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1584 Pvu-Chr9 22255194 22256723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1584 K11097 - gmx:100807929 170.629