Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1578 ATGAAGAAATCGGCGAATTGGGGATTATTTCTGCTTCTGCTCCTCTTCTTCACCTCCTCTACTTCTTCAGCATGGTTCGGTAGCAAACACAAAAGTTCAAGCTCAAGCGGAAGGATTCGTTCCGATGAAGCCTCTTCGTCATCGTCATCACCGTTCCTACTAAACCGTTTCCGTTCCGGTTCTGCCGTGGTGTTCGCCGTTCACGGCAATGTTTACCCTGTCGGGTTTTATAATGTCACTCTCAACATCGGGCAACCACCAAGGCCATATTTTCTTGATATTGACACAGGTAGCGACCTTACGTGGCTTCAATGTGATGCCCCTTGTTCCCGTTGCTCTCAGACACCCCATCCACTTTATAGGCCCAGCAATGACCTAGTGCCATGCAGGCATGCCCTTTGCGCATCCTTGCACCACACTGATAACTACGACTGCGAAGTTCCACATCAATGTGACTATGAAGTTGAGTATGCAGATCATTACTCATCGCTTGGTGTTCTTCTCCATGATGTCTACACTCTCAACTTTACAAATGGAGTCCAACTTAAAGTTCGTATGGCCCTTGGATGCGGATATGATCAGATTTTTCCAGATCCTTCTCATCACCCGTTAGATGGAATGCTTGGCCTTGGCAGGGGAAAAACTAGCTTGACATCACAGCTGAACAGTCAGGGTTTGGTCCGAAATGTGGTTGGACACTGTTTGAGTGCACAGGGAGGAGGGTATATCTTTTTCGGAGAAGTTTATGATTCTTCTAGACTAACATGGACTCCAATGTCATCCAGAGATTACAAACATTACTCAGCAGCTGGGGCAGCTGAACTCATTTTTGGAGGGAAGAGGACTGGGGTTGGAAATCTTCATGCTATTTTTGACACTGGGAGTTCTTACACCTACTTCAACTCTAATGCTTACCAAACACTAATCTCTTTGTTGAGGAAGGAATCAGGTGGAAAGCCCCTAAAAGAAGCACACGGTGATCAAACTCTCCCTCTCTGTTGGCATGGCAAAAGACCTTTCAAAAGCATATATGAAGTGAGAAAATACTTCAAGCCAATCACGCTTAGTTTCAGCAGTAATGGAAGAAGTAAAGCTCAGTTTGAAATCCCTCCTGAAGGATATCTAATAATATCTAATATGGGAAATGTTTGCTTGGGCATTCTAAACGGCTCTGAAGTAGGGATGGGTGATCTGAACCTAATAGGAGACATATCCATGCTAAACAAAGTGATGGTATTTGACAACGATAAGCAGTTGATCGGTTGGACACCAGCAGATTGTGATCGGGTTCCAAAATCCAGAGATGTCAGCATTTGA 1317 0.448 MKKSANWGLFLLLLLFFTSSTSSAWFGSKHKSSSSSGRIRSDEASSSSSSPFLLNRFRSGSAVVFAVHGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHALCASLHHTDNYDCEVPHQCDYEVEYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVVGHCLSAQGGGYIFFGEVYDSSRLTWTPMSSRDYKHYSAAGAAELIFGGKRTGVGNLHAIFDTGSSYTYFNSNAYQTLISLLRKESGGKPLKEAHGDQTLPLCWHGKRPFKSIYEVRKYFKPITLSFSSNGRSKAQFEIPPEGYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMLNKVMVFDNDKQLIGWTPADCDRVPKSRDVSI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1578 438 MobiDBLite consensus disorder prediction 27 50 - -
Pvu9g1578 438 Pfam Xylanase inhibitor N-terminal 77 246 IPR032861 -
Pvu9g1578 438 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 432 - -
Pvu9g1578 438 SUPERFAMILY Acid proteases 69 430 IPR021109 -
Pvu9g1578 438 Pfam Xylanase inhibitor C-terminal 285 423 IPR032799 -
Pvu9g1578 438 Gene3D Acid Proteases 57 245 IPR021109 -
Pvu9g1578 438 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 289 300 IPR001969 GO:0004190|GO:0006508
Pvu9g1578 438 Gene3D Acid Proteases 246 431 IPR021109 -
Pvu9g1578 438 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Pvu9g1578 438 PRINTS Pepsin (A1) aspartic protease family signature 289 300 IPR001461 GO:0004190|GO:0006508
Pvu9g1578 438 PRINTS Pepsin (A1) aspartic protease family signature 399 414 IPR001461 GO:0004190|GO:0006508
Pvu9g1578 438 PANTHER ASPARTYL PROTEASES 8 432 IPR001461 GO:0004190|GO:0006508
Pvu9g1578 438 ProSiteProfiles Peptidase family A1 domain profile. 77 423 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1578 Pvu-Chr9 22194415 22199545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1578 47 433 Miscellaneous Gene Families AT1G44130 52.041 8.29e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1578 - - gmx:100819172 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1578 9 22194415 22199545 Pvu9g1578 9 22194415 22199545 ECH