Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1575 ATGTCGCTTATCCCAAGTTTCTTCGGCGGTCGAAGGAGCAACGTTTTCGACCCTTTCTCTCTTGATGTGTGGGACCCATTCAAGGATTTTCATTTTCCATCTCAGCTTTCTGCTGAAAATTCTGCATTTGTGAACACCCGAGTGGATTGGAAGGAAAGCCCAGAAGCGCACGTGTTGAAGGCTGATATTCCAGGGCTGAAGAAGGAGCAAGTGAAGGTGGAGATTGAAGATGACAATATTCTTCAGATAAGCGGAGAGAGAAACGCTGAGAAAGAAGATAAGAACGATAAGTGGCACCGCGTGGAGCGTAGCAGTGGTAAGTTCTTGAGGAAGTTCAGGTTGCCACAAAATGCAAAAGTGGATCAAGTTAAAGCTTCCATCGAAAATGGGGTTCTCACTGTCACCATTCCCAAGGAACAGGTCAATAAGCCTGACGTTAAAGCCGTTCAAATCTCGGGTTAA 462 0.4589 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFHFPSQLSAENSAFVNTRVDWKESPEAHVLKADIPGLKKEQVKVEIEDDNILQISGERNAEKEDKNDKWHRVERSSGKFLRKFRLPQNAKVDQVKASIENGVLTVTIPKEQVNKPDVKAVQISG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1575 153 CDD ACD_ScHsp26_like 47 138 - -
Pvu9g1575 153 Gene3D - 10 153 IPR008978 -
Pvu9g1575 153 SUPERFAMILY HSP20-like chaperones 16 153 IPR008978 -
Pvu9g1575 153 ProSiteProfiles CS domain profile. 43 147 IPR007052 -
Pvu9g1575 153 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 153 - -
Pvu9g1575 153 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 39 153 IPR002068 -
Pvu9g1575 153 Pfam Hsp20/alpha crystallin family 49 152 IPR002068 -
Pvu9g1575 153 PANTHER 17.3 KDA CLASS I HEAT SHOCK PROTEIN 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1575 Pvu-Chr9 22174644 22175105 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1575 K13993 - gmx:100526893 279.256