Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1570 ATGATCGCTTCCACCTCCAACATTGGAACTCACCCTTTGTGCTTTCTCTCCAAACCAGCCACACACACCACAATAGGGTTTCTGTCTCTCACCCTACACTCTCGAGGTATTGCTGTGGCACTTTCCTCCTCGTCAACTAGGACCACCCAGAAGCTCACGTGCCACTTCAACGGCAAAGATGGAAGCTTTGAGCAGCAAGAGGAAGAGGGTGAGCGTGAGGTGCTTTGTGAGGTCCAAGTGGTGTCGTGGAGGGAACGCAGAGTCAATGCCCAAATCACAGTCGATGCTGACACTGAATCCGTTTGGAATGCTCTCACTGATTATGAGCGTCTCGCTGATTTCATCCCAAATCTTGTATGGAGTGGGAAAATTCCTTGTCCATACCCAGGAAGGATATGGTTAGAGCAAAGGGGATTCCAAAGGGCTATGTATTGGCATATTGAAGCTCGTGTTGTCTTGGATCTTCGGGAAGTCGTCAATTCAGAATGGGATCGAGAACTGCACTTTTCCATGGTTGATGGAGACTTTAAGAAGTTTGATGGCAAATGGTCCGTAAAATCTGGAACAAGGTCATCAACTGCTATTTTATCGTATGAAGTTAATGTGATACCAAGATTCAATTTCCCTGCTATTTTTTTGGAAAGGATTATCAGATCTGATCTTCCTGTGAACCTTCGAGCTTTGGCATACAGAGCTGAAAAGAATTTTATGGAATATCAGAAACTTCCAGTGTCAGAAAACCAGTTGCATAAAACTTATGTGGCAATTAACGGATCATCTGTTAAAAAGATAAATGGTACTTTGTGTGAAGGTGTTAAAAAGATAAATGGCGCTTTGTGTGAAAGTGATAAGTTGTCTCCTGCAGAGAACAAAAAAGAAATTGCCACCTCTGCTTCCAGTTCAGTACTCACATCTTCCAGTGAGGTGAGAAGCAACTGGGGTGTATTTGGAAAGGTTTGCAGGCTTGACAGACCTCGAATGGTGGATGAAGTTCATCTCCGCAGATTTGATGGACTTCTGGAAAATGGAGGTGTTCATCGCTGTGTTGTTGCAAGCATAACAGTTAAAGCTCCTGTTCGCGAAGTCTGGAATATTCTAACTGCCTATGAGACTCTTACTGAGATAGTTCCAAATCTAGCAATCAGTAAGGTTGTATCACGAGATAACAATAAAGTCCGTGTTCTTCAGGAAGGGTGTAAGGGCCTACTTTATATGGTGCTTCATGCTCGTGTTGTGTTGGAGTTGTGTGAATATTTAGAACAGGAAATCAGTTTTGAACAAGTTGAAGGGGACTTTGATTCCTTCCGGGGAAAATGGATTTTTGAGCAACTAGGAAATCATCACACGCTGCTAAAGTACTCTGTGGAGTCAAAAATGCGCAAGGATACTTTCCTTTCTGAAGCCATCATGGAGGAGGTCATTTATGAAGATCTCCCATCAAACTTGTCTGCAATAAGAGACTATATTGAGAACAAGAATGCATCAAAATCTTCAGAATTTTGTGAGCAGAATACAAATTCAGGGCAACAAATTGTTTCATCAAGCTGTCAAAATGATGACAACACTGGTTCAGTCGAGGAAGTTCCTAGTTGCGATGCTCGAAGTTCATCTCAGCAAAGACCTAAAGTGCCAGGCTTACAGAGGAATATTGAAGTCCTAAAATCTGAACTCCTGCAATTCATTGCAGAACATGGACAGGAAGGATTCATGCCGATGAGGAAGCAACTTCGTTTGCATGGAAGAGTGGATATTGAGAAGGCTATAACTCGCATGGGTGGATTCAGAAAGATTGCAACCGTATTGAACCTTTCTTTGGCTTACAAACACCGCAAACCAAAGGGTTATTGGGACAATCTTGAAAATTTACAGGAAGAGATAAGTAGGTTTCAAAGGAGCTGGGGAATAGACCCTTCATTTATGCCCAGTAGAAAGTCATTTGAACGTGCAGGGCGGTATGATATTGCACGTGCACTGGAAAAGTGGGGTGGACTACAGGAGGTTTCTCGGCTTCTGTCACTGAAGGTAAGACAAAGGAGCAGACATGAGAACATTGGTAAGGATAAGAGGAGTGATCATGCAGATAGTGAGATGAAGACACCATGTATTTCTCAAGACACACAAAAGTGGCTTACAAAACTAAAACAGATGGACATAAATTGGTTTGAGTAA 2169 0.4265 MIASTSNIGTHPLCFLSKPATHTTIGFLSLTLHSRGIAVALSSSSTRTTQKLTCHFNGKDGSFEQQEEEGEREVLCEVQVVSWRERRVNAQITVDADTESVWNALTDYERLADFIPNLVWSGKIPCPYPGRIWLEQRGFQRAMYWHIEARVVLDLREVVNSEWDRELHFSMVDGDFKKFDGKWSVKSGTRSSTAILSYEVNVIPRFNFPAIFLERIIRSDLPVNLRALAYRAEKNFMEYQKLPVSENQLHKTYVAINGSSVKKINGTLCEGVKKINGALCESDKLSPAENKKEIATSASSSVLTSSSEVRSNWGVFGKVCRLDRPRMVDEVHLRRFDGLLENGGVHRCVVASITVKAPVREVWNILTAYETLTEIVPNLAISKVVSRDNNKVRVLQEGCKGLLYMVLHARVVLELCEYLEQEISFEQVEGDFDSFRGKWIFEQLGNHHTLLKYSVESKMRKDTFLSEAIMEEVIYEDLPSNLSAIRDYIENKNASKSSEFCEQNTNSGQQIVSSSCQNDDNTGSVEEVPSCDARSSSQQRPKVPGLQRNIEVLKSELLQFIAEHGQEGFMPMRKQLRLHGRVDIEKAITRMGGFRKIATVLNLSLAYKHRKPKGYWDNLENLQEEISRFQRSWGIDPSFMPSRKSFERAGRYDIARALEKWGGLQEVSRLLSLKVRQRSRHENIGKDKRSDHADSEMKTPCISQDTQKWLTKLKQMDINWFE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1570 722 MobiDBLite consensus disorder prediction 681 698 - -
Pvu9g1570 722 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN 38 722 - -
Pvu9g1570 722 Pfam Polyketide cyclase / dehydrase and lipid transport 94 228 IPR005031 -
Pvu9g1570 722 Pfam Polyketide cyclase / dehydrase and lipid transport 355 486 IPR005031 -
Pvu9g1570 722 Gene3D - 87 236 IPR023393 -
Pvu9g1570 722 SUPERFAMILY Bet v1-like 349 491 - -
Pvu9g1570 722 CDD SRPBCC_11 349 490 - -
Pvu9g1570 722 Gene3D - 340 499 IPR023393 -
Pvu9g1570 722 SUPERFAMILY Bet v1-like 87 234 - -
Pvu9g1570 722 MobiDBLite consensus disorder prediction 681 700 - -
Pvu9g1570 722 CDD SRPBCC_11 88 234 - -
Pvu9g1570 722 PANTHER OS03G0837900 PROTEIN 38 722 - -
Pvu9g1570 722 MobiDBLite consensus disorder prediction 511 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1570 Pvu-Chr9 22112839 22118588 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1570 - - gmx:100812363 1291.17