Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1568 ATGTGGCGTGGAAGTTTCTCCAAATTCGCCATTAGACCTTCGGCTCTAGGGTTTCTGACGCGGTCTTTCTCGCGCGAGGCGGAGGGGAAGAGGTTCGCTGCGTTGTGGGGGAACGGCGATTACGGCAGATTGGGTCTTGGCAACTTAGATTCGCAATGGAAACCCGTCGTTTGCTCCGCCTTCCGCAACCAGACCCTTAAAGCCATTTCTTGCGGCGGGGCTCACACTCTCTTCTTAACTGATGATGGAAGTGTATATGCAACTGGTCTTAATGATTTTGGGCAGCTTGGTGTCTCAAAGAGTAAGCACTACTCAGTGGAGCCACTTCGTGTTTTTGGAGAGGAGAAGAAAATTATGCAGATCTCTGCTGGTTATAATCATTCTTGTGCGATCACAGTGGATGGAGAACTTTACATGTGGGGAAAAAATACAAGTGGGCAGCTTGGATTTGGAAAAAGGGCCCCAAATATAGTTCCTTTGCCTACTAAAGTAGAGTACTTGGATGGAATCAACATTAAAATGGCAGCTTTGGGTTCAGAACACACTCTCGCAATTAGTGATGGTGGGGAGGCCTTTAGTTGGGGAATGGGAGAGTCTGGCAGACTTGGTCATGGCCACGAGTCAAGCATCCTAGGATTCTTCAAAAGTTCCAGTGAGTATACGCCAAGGCTTATAAAGGATCTTGAAGGAATCAAGGTAAAATACGTAGCTGCTGGGTTGCTAAATTCAGCTTGTACTGATGAAAATGGTTCTGTTTTAGTATTTGGTGAAAGAAGAATTGAAAATTTGCATTTAAAGGGGACGAGTGATGCAACAAGACCATCCTTGGTCAGTGAACTTCCATACTCTAAAGAAGTTGCTTGTGGTGGCTACCACACCTGTATCCTGACAAATTCTGGAGAGCTTTATACTTGGGGTTCAAATGAAAATGGGTGCCTTGGCATTGGTTCCTCAGATGTTGTTCATCTACCTGAAAAGGTTCAAGGGCCATTCTTGAAGTCTTCTGTTAGTCAGGTTTCCTGTGGTTGGAAACACACTGCAGCCATCTCTGAAGGAAGAGTGTTCACATGGGGCTGGGGAGGTTCAAATGGGACGTTCTCTGAAGTTGGACATTCTTCTAGTGGACAATTGGGTCATGGAAGTGATGTGGATTATATAAATCCTACAAGAGTGTGCTTTGGAGAGGAGGTGAAAGCGTTGCAAGTTTCATGCGGGTTCAATCATACAGGTGCTATACTGGAATATGCATAA 1251 0.4548 MWRGSFSKFAIRPSALGFLTRSFSREAEGKRFAALWGNGDYGRLGLGNLDSQWKPVVCSAFRNQTLKAISCGGAHTLFLTDDGSVYATGLNDFGQLGVSKSKHYSVEPLRVFGEEKKIMQISAGYNHSCAITVDGELYMWGKNTSGQLGFGKRAPNIVPLPTKVEYLDGINIKMAALGSEHTLAISDGGEAFSWGMGESGRLGHGHESSILGFFKSSSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGSVLVFGERRIENLHLKGTSDATRPSLVSELPYSKEVACGGYHTCILTNSGELYTWGSNENGCLGIGSSDVVHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEEVKALQVSCGFNHTGAILEYA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 31 82 IPR000408 -
Pvu9g1568 416 Gene3D - 158 415 IPR009091 -
Pvu9g1568 416 Gene3D - 26 157 IPR009091 -
Pvu9g1568 416 PANTHER OS11G0545800 PROTEIN 28 416 - -
Pvu9g1568 416 PANTHER UBIQUITIN-PROTEIN LIGASE E3A-RELATED 28 416 - -
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 250 299 IPR000408 -
Pvu9g1568 416 SUPERFAMILY RCC1/BLIP-II 35 413 IPR009091 -
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 300 352 IPR000408 -
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 189 249 IPR000408 -
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 83 134 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 32 48 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 66 79 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 85 101 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 135 151 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 175 191 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 191 205 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 289 307 IPR000408 -
Pvu9g1568 416 PRINTS Chromosome condensation regulator RCC1 signature 347 368 IPR000408 -
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 352 415 IPR000408 -
Pvu9g1568 416 Pfam Regulator of chromosome condensation (RCC1) repeat 134 185 IPR000408 -
Pvu9g1568 416 Pfam Regulator of chromosome condensation (RCC1) repeat 370 412 IPR000408 -
Pvu9g1568 416 Pfam Regulator of chromosome condensation (RCC1) repeat 82 131 IPR000408 -
Pvu9g1568 416 Pfam Regulator of chromosome condensation (RCC1) repeat 189 240 IPR000408 -
Pvu9g1568 416 Pfam Regulator of chromosome condensation (RCC1) repeat 36 79 IPR000408 -
Pvu9g1568 416 Pfam Regulator of chromosome condensation (RCC1) repeat 299 349 IPR000408 -
Pvu9g1568 416 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 135 188 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1568 Pvu-Chr9 22062815 22077804 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1568 - - vun:114196144 779.245