Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1567 ATGCAGGAAGAGAAGAAGATGAAGGTGAAGAAAGGGTTCTTGGCTGTTCAAGTGGGTTTAGACGACGACGACCAACCTGGTTCCTCTCCTCAGAGATTTGTCATTCCTATCTCGTACCTTTACCACCCTCTCTTCAAGCGTCTTCTCGACAAAGCTCACGAGGTCTACGGCTACCACACCGATGGCCCCCTCAAGCTTCCCTGCTCCGTCGACGATTTTCTCCATCTCCGTTGGCTTATCGAGAAGGAGTCCTCTTCCCATCAACACCCCCCTAACCAAACCAACCATCGCCTTCCCCACGCTTTGCACTTCCACTCCTGTTGA 324 0.5216 MQEEKKMKVKKGFLAVQVGLDDDDQPGSSPQRFVIPISYLYHPLFKRLLDKAHEVYGYHTDGPLKLPCSVDDFLHLRWLIEKESSSHQHPPNQTNHRLPHALHFHSC* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1567 107 Pfam Auxin responsive protein 5 80 IPR003676 GO:0009733
Pvu9g1567 107 PANTHER OS02G0769100 PROTEIN 1 92 - -
Pvu9g1567 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1567 Pvu-Chr9 22055278 22056440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1567 9 90 Calmodulin-binding Proteins AT3G43120 42.353 3.62e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1567 K14488 - gmx:100809305 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1567 9 22055278 22056440 Pvu9g1567 9 22055278 22056440 ECH