Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1563 ATGGATTCAAGTTCATCCCCGGAATTCGAATATTTGTTTAAGTTGTTGATGATCGGGGACTCAGGTGTTGGCAAGAGTAGTCTCCTCCTCTGTTTCACCTCTGATTCCTTTGAAGATCTTTCTCCGACAATTGGGGTTGATTTTAAGGTCAAGTATTTAAACATGGAAGGGAAAAAGCTGAAGCTTGCCATTTGGGACACAGCTGGTCAAGAGAGATTCAGAACATTGACGAGTTCTTACTACCGAGGTGCACAAGGGATCATTATGGCTTATGATGTAACTCGGCGGGAAACGTTTACGAATCTCGCTGATATATGGTCAAAGGAAATAGAACTTTATTCAACAAATTCGGAATGCATCAAAATGCTTGTTGGAAACAAAGTGGACAAG 390 0.4128 MDSSSSPEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLNMEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLADIWSKEIELYSTNSECIKMLVGNKVDK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1563 130 Gene3D - 1 130 IPR027417 -
Pvu9g1563 130 SMART rho_sub_3 15 130 IPR001806 GO:0003924|GO:0005525
Pvu9g1563 130 ProSiteProfiles small GTPase Rab1 family profile. 8 130 - -
Pvu9g1563 130 TIGRFAM small_GTP: small GTP-binding protein domain 11 130 IPR005225 GO:0005525
Pvu9g1563 130 PRINTS Transforming protein P21 ras signature 13 34 - -
Pvu9g1563 130 PRINTS Transforming protein P21 ras signature 35 51 - -
Pvu9g1563 130 PRINTS Transforming protein P21 ras signature 53 75 - -
Pvu9g1563 130 PRINTS Transforming protein P21 ras signature 117 130 - -
Pvu9g1563 130 PANTHER DRAB5-RELATED 1 130 - -
Pvu9g1563 130 PANTHER SMALL GTPASE FAMILY RAB PROTEIN 1 130 - -
Pvu9g1563 130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 129 IPR027417 -
Pvu9g1563 130 SMART rab_sub_5 13 130 - -
Pvu9g1563 130 SMART ras_sub_4 10 130 - -
Pvu9g1563 130 ProSiteProfiles small GTPase Ras family profile. 4 130 IPR001806 GO:0003924|GO:0005525
Pvu9g1563 130 Pfam Ras family 14 129 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1563 Pvu-Chr9 21982569 21984606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1563 1 110 EF-hand Containing Proteins AT5G27540 26.364 6.96e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1563 K07910 - gmx:100779729 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2799 2 43734944 43739819 Pvu9g1563 9 21982569 21984606 PCT