Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1554 ATGGCGAGCCAAACCCTAGATCATCTTACTAATCCATCCAATCCATACTATCTCAGCACCAATGAAAATTCGACCATGGTTCTCGTACCTTCCTTGTTAACCAAAAACAATTATCATGAATCGGCGAAGTATATGCAAACATCCCTACGATCTAAGAGCAAGTTGCGATTTATTGACGAAAGTCTTCTGTCTCCACCCATCGGCAATCATTTATACGAAACGTGGAATCAAAGTAATCAAATGGTGGTTTCTTGGCTTCGCAGTGCGATGACAGCTTCAATAGATAAATTTGTTTTGTGGATGGATGTCGTTGTTGAAATCTGGAATGATGTGCGCAATAGATTAAAAACATCTTGGGAGGAATTAGAGATGTTTGAGCCATTGCTGAAGTGTTCTTGTACAAACCCTTGTAGCTGTGGTGTTGTTACTTGTGCTAGAACTTGTCGAACCACAGGCTACATTATACGATTCTTAAGGGGTCTCAACGAACAATACAGTCAAATTCAATCTCAAATCATGTTAATGGATCCCATGCCATATATCACATGGGTGTTCTCTCTAATCGTTCAACAAGAACGGGAATTTGGAACCCCATTTCTCCCTGATAACAATGATCCTGACAAGGTGTTGATGAATGTTGTGGTTGATCCATGA 654 0.4021 MASQTLDHLTNPSNPYYLSTNENSTMVLVPSLLTKNNYHESAKYMQTSLRSKSKLRFIDESLLSPPIGNHLYETWNQSNQMVVSWLRSAMTASIDKFVLWMDVVVEIWNDVRNRLKTSWEELEMFEPLLKCSCTNPCSCGVVTCARTCRTTGYIIRFLRGLNEQYSQIQSQIMLMDPMPYITWVFSLIVQQEREFGTPFLPDNNDPDKVLMNVVVDP* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1554 217 Pfam gag-polypeptide of LTR copia-type 21 65 IPR029472 -
Pvu9g1554 217 PANTHER - 6 115 - -
Pvu9g1554 217 PANTHER - 6 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1554 Pvu-Chr9 21921718 21922467 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1554 - - pvu:PHAVU_009G150400g 450.669