Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1553 ATGCCCGGTCTGGATGCGGCACCGAACACGCTGACGAGGCGCCCGTCCAGAAGTGCCGCCACGACGTTCTCAGCGGAGGTTTTCGACAATGAGGTTGTTCCGTCTGCGCTCGCTTCCATTTCGCCGATTCTCCGAGTCGCCAATGAGATCGAAAGCGAACGCCCTAGGGTTGCTTATCTATGTCGGTTCTATGCTTTCGAGAAGGCGCACCGGTTGGATCAGAGCTCCAGCGGACGTGGTGTGAGGCAATTTAAGACGCTGTTGCTGCAGCGATTGGAGAGG 282 0.578 MPGLDAAPNTLTRRPSRSAATTFSAEVFDNEVVPSALASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLER 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1553 94 Pfam Vta1 like 39 93 IPR039431 -
Pvu9g1553 94 Gene3D - 24 94 IPR023175 -
Pvu9g1553 94 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 6 94 - -
Pvu9g1553 94 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 6 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1553 Pvu-Chr9 21909872 21910820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1553 3 94 Glycosyltransferase AT5G13000 67.742 1.41e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1553 K11000 - gmx:100777245 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1553 9 21909872 21910820 Pvu2g2797 2 43706470 43722145 PCT