Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1546 ATGGTAAACAGAGGCTCCCATGGCTCTGGCGGCCTCTTCTCTGGTAGGTTCCATGCTAGAAAGCTAACCCCAAGCGTCATCACTTTCTATACCATCATCATGTTTGCTTTCTCCATCTTCTTCTTTTTGTTCTACGCGAGGAACGTCACTCTTGATCAAGATCCACGACGCCCTTTGCTTTCTCGACAATCTAATCCTCATCAGGTACCAGAGTTACATGCGCACTATGCGAAGCAACTTTGGGATTCTCCGTTCAATCATAGCTTACACCAGTGTGTCGAGCCAACAACTAAATATAAAGCTGCCAAAGGGTTTGATCGCTATCTAACTGTGAGAAGTAATGGAGGACTAAATCAAATGCGGACCGGTATATCAGACATGGTGGCTGTGGCACATATGATGAATGCAACTTTAGTCATACCTCAATTGGATAAACGTTCATTCTGGAAAGACTCAAGTGTATTTTCAGATATATTTGACGAGATTCATTTCATTGAATCCCTCAAAGGTGATATCAGGATTGTTAATGAGCTTCCCAAAAACTTGGAAGGTATCCCCCGTGCCAGGAAACACTTTACTTCCTGGGCTGGAGTCGGTTACTATACAGATTTGACAAGGTTATGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATACAGAGGTTGAGATGCCGTGCAATGTATCAGGCACTTCAATTTTCTCCTCCTATAGAGAATTTAGGAAAGAGGTTGGTGGATCGGCTGAGAACACATGGAGGAAGATATATCGCTCTCCATCTGAGATATGAGAAAGATATGCTGTCTTTTACGGGTTGTGCTTATGGTCTGACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAAAGATAAATTCGACAGAACAGAGAATTGGAGGATTTTGTCCACTGACACCAAAAGAGGTGGGCATTTTTCTTCGTGCTCTTGGATACCCCCCATCTACACCAATATACATAGCAGCTGGAGAGATCTATGGTGGTAATACTCTTCTTTCGGAGCTCTCATCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTCACTAATCACGCTTCCCAATCTGCTGCACTTGATTACATAATATGTGTGGAGAGTGATGTATTTGTTCCGTCATATTCAGGAAATATGGCAAGAGCTGTTGAGGGACACCGCAGATTCTTAGGTCACCGCAAGACAATCAATCCAGACAGGAAAGGTCTGGTTGGAATTTTTGATAAGCTGGAAACTGGAGTGCTTGAAGAAGGAAGGGAACTGTCGCATATGGTACAGCGATTGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCATGGTTCTCTACCAGGAGTCAAAGGCCGAGCAAGATTTAGGACTGAAGAGTCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTATAAGCAAACTACAAATAACATGA 1536 0.4264 MVNRGSHGSGGLFSGRFHARKLTPSVITFYTIIMFAFSIFFFLFYARNVTLDQDPRRPLLSRQSNPHQVPELHAHYAKQLWDSPFNHSLHQCVEPTTKYKAAKGFDRYLTVRSNGGLNQMRTGISDMVAVAHMMNATLVIPQLDKRSFWKDSSVFSDIFDEIHFIESLKGDIRIVNELPKNLEGIPRARKHFTSWAGVGYYTDLTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQALQFSPPIENLGKRLVDRLRTHGGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRILRENTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLRALGYPPSTPIYIAAGEIYGGNTLLSELSSRFPNLIFKESLATPEELKDFTNHASQSAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFDKLETGVLEEGRELSHMVQRLHKNRQGAPRKRHGSLPGVKGRARFRTEESFYENPYPECICGSISKLQIT* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1546 511 CDD O-FucT_plant 108 429 IPR024709 -
Pvu9g1546 511 PANTHER O-FUCOSYLTRANSFERASE 38 13 504 - -
Pvu9g1546 511 Pfam GDP-fucose protein O-fucosyltransferase 108 423 IPR019378 -
Pvu9g1546 511 Gene3D - 238 432 - -
Pvu9g1546 511 PANTHER OS02G0726500 PROTEIN-RELATED 13 504 - -
Pvu9g1546 511 PIRSF UCP009360 8 504 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1546 Pvu-Chr9 21839338 21844619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1546 79 502 Miscellaneous Gene Families AT1G22460 58.353 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1546 - - gmx:100810961 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0105 9 1716659 1725085 Pvu9g1546 9 21839338 21844619 ECH
Pvu9g1546 9 21839338 21844619 Pvu9g1546 9 21839338 21844619 ECH