Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1542 ATGGCAGAAAAAACTGAATTATCCAAGACGGAAATGGCTGAAAAAAATGAATCATCCACGACGGCAACGGTGAAGAGCGCAGAGGAATTGGAAACGCACAAAATGAGCAAAGGAGAAGCGAGTGAGCCTCCCATTGAAGAACTCAAGAAGCTTACAATCATGAAGGAAGAAGAAGAAGAACCGACGGTTAAGCTAAAAACTTCTGAAGGCATCATCTACTATGTGGAAGCCTCCGTCGTGAAGGAGATGGAAACGGTGCAGTCTGTGATCGATGCCACTGGAGCCAGCCCCGGCGTCACCATTCCTCTGCAAAACCTAACCAGCTGTGAACTGGGCAGGATCCTCGAATTCCGGGCGAAGCGGAGCCGTGTTGGCAGCAACCCGATTGCATTGAGAAAGTTCGACGAAAAGTTCATGGCGAAGCTGACCCCTGACCAGATGAAGGAACTGTACCTCACTGCTAACTATCTCAACATGAGTCATTTAATGGATGTGATATCCAGGGCAATTGCAAACTTCATCAAGCACAAGAGCGCTGAGTTTGCGCGGGATTTCTTCGGCGTCGTTAGCGATTATACGCCGGAGGAGGAGGCGGCGTATCGTCAGGCCAACGCATGGGCATTCAAAAACTTAGACAAAGAGTCAGTGTAG 651 0.4916 MAEKTELSKTEMAEKNESSTTATVKSAEELETHKMSKGEASEPPIEELKKLTIMKEEEEEPTVKLKTSEGIIYYVEASVVKEMETVQSVIDATGASPGVTIPLQNLTSCELGRILEFRAKRSRVGSNPIALRKFDEKFMAKLTPDQMKELYLTANYLNMSHLMDVISRAIANFIKHKSAEFARDFFGVVSDYTPEEEAAYRQANAWAFKNLDKESV* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1542 216 Pfam Skp1 family, dimerisation domain 162 207 IPR016072 GO:0006511
Pvu9g1542 216 Gene3D Potassium Channel Kv1.1; Chain A 61 210 IPR011333 -
Pvu9g1542 216 MobiDBLite consensus disorder prediction 1 47 - -
Pvu9g1542 216 PANTHER SCF UBIQUITIN LIGASE, SKP1 COMPONENT 62 210 - -
Pvu9g1542 216 MobiDBLite consensus disorder prediction 27 47 - -
Pvu9g1542 216 SUPERFAMILY Skp1 dimerisation domain-like 131 206 IPR036296 GO:0006511
Pvu9g1542 216 PANTHER SKP1 62 210 IPR016897 GO:0006511
Pvu9g1542 216 SMART skp1_3 60 159 IPR001232 GO:0006511
Pvu9g1542 216 Pfam Skp1 family, tetramerisation domain 62 120 IPR016073 GO:0006511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1542 K03094 - gmx:100811974 175.252