Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1539 ATGAAAGAAGTGACTAGTAAAAAGCCAACAGTCAAAAACGAACTTAGAAATCAATTGCGCTTCAGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTGCGTTTTCATTATGGTCTTACAGAACGACAATTGCTGAAATACGTTCGTATCTCCGGAAAAGCTAAAGGATCAACTGGTCAGGTTTTATTACAACTACTTGAAATGCGCTTGGATAACATACTTTTTCGATTGGGTATGGCTGCGACTATTCCTCAAGCCCGCCAATTCATAAACCATAGACATGTTTTAGTTAATGGTCGTATACTTTTCTGA 324 0.3549 MKEVTSKKPTVKNELRNQLRFSKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRISGKAKGSTGQVLLQLLEMRLDNILFRLGMAATIPQARQFINHRHVLVNGRILF* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1539 107 ProSitePatterns Ribosomal protein S4 signature. 70 94 IPR018079 GO:0019843
Pvu9g1539 107 Pfam S4 domain 72 105 IPR002942 GO:0003723
Pvu9g1539 107 ProSiteProfiles S4 RNA-binding domain profile. 72 105 - -
Pvu9g1539 107 Gene3D - 79 106 IPR036986 GO:0003723
Pvu9g1539 107 Gene3D Ribosomal Protein S4 Delta 41; Chain A, domain 1 1 78 - -
Pvu9g1539 107 PANTHER 30S RIBOSOMAL PROTEIN S4, CHLOROPLASTIC 3 106 - -
Pvu9g1539 107 Pfam Ribosomal protein S4/S9 N-terminal domain 6 71 IPR001912 GO:0019843
Pvu9g1539 107 PANTHER 30S 40S RIBOSOMAL PROTEIN 3 106 IPR022801 -
Pvu9g1539 107 SMART Ribosomal_S4_2 16 71 IPR001912 GO:0019843
Pvu9g1539 107 SUPERFAMILY Alpha-L RNA-binding motif 16 105 - -
Pvu9g1539 107 CDD S4 72 105 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1539 K02986 - gmx:3989263 186.037