Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1537 ATGAGAGGAACAATGGGTGCTTCTCCTCATTCCGTTGAAGCTCGACACCGTTTACCTGCATCCATTGAAGATTTATACAAACGAAGATTGCCAAGAAGCAAAGCAAATGCAGAGAAGCCTTTCCACTTATCAGTTCAAGATAGGAGCTCAAGATGCAAGTTGTCTTTCTTAAAATTCATCCTATTGATAACCATAAGTGGCACTTTTGTAACACTGCTGTATTCTCCAGAGGTTTACAATACCAACCATTTATCAAGCTCAGGCTCTCGGTGGATATGGGGTGGTGCAGATCCTCGTTACATATCCAATGTAGACACTGACTGGGATGACATACAGAAAATTACGGATAAGCTGACAGGGCAAGACGAACTTCAAGGAATTGGGCTTGTAAATTTCAACAAGACTGAACAAGTCCATTGGGAGCATCTTATTCCTGATACAACACATGTTGTTCTGCCTCTGGAGAATGCTGCAAGAAATGTGACATGGGAATCCTTGTACCCGGAATGGATTGATGAGGAAGAGGAAACTGAAGTTCCTGTTTGTCCTTCTCTGCCTACTCTTAGGTCCCCTGGCATAAGACTTAACCTCATTGCCGTGAAGCTTCCTTGTAGGAATGGAGGGAATTGGTCCAGAGATGTTGCTCGTTTGCACCTTCAGCTTGCAGCTGCTGCCCTTGCAACCTCTTTCAAAGGCAACTACCCTGTTTATGTGCTCTTCATTACCAACTGTTTTCCAATACCAAATCTGTTTACATGCAAAGAACTAGTTGGACGTGAAGGGAATGTGTGGTTATACAAACCAAACTTGAGTGTCCTGAGAGAAAAAGTCCAGCTTCCGGTGGGGTCTTGTGAACTTGCACTTCCAATGAGAGGCAAAGAGTTGGCTTACAATGGGAATGCTCCTAGAGAAGCCTATGCAACAATTCTGCACTCAGCTCATGTTTACGTTTGTGGGGCTATAGCTGCTGCACAAAGCATCCGCATGTCTGGATCAACTCGAGACTTTGTAATACTTGTTGATGAGACGATCAGTGGCTATCACAGAAGTGGTTTGGAAGCAGCAGGATGGAAGGTTAGAACAATACAAAGGATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGCTATGGCAGTTAACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATACTAAGAAATATAGATTTCCTATTTGGAATGCCAGAAATCACCGCCACTGGAAACAATGCCACTCTCTTCAACTCCGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTGATGAATCACATAAACGAGATAGAGTCCTACAATGGAGGGGACCAAGGATATTTGAATGAAATATTTACTTGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAACAGATGAAAACTTTATTGTTTGGCGCAGAGCCTCCAATTTTGTACGTCCTGCACTATCTAGGTGTGAAGCCATGGTTATGCTTCCGGGACTATGATTGCAACTGGAATGCTGATATCTTTCATGAATTTGCAAGTGATGTTGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAGCAGTTTTGTCTCCTGAAATCAAAGCAGAAGGCACAGTTGGAGTGGGATCGTAGGCAGGCTGAAATAGCAAATTACACGGATGGGCATTGGCGAATAAAAGTTAAAGATAGACGCTTGAAGAAATGTATAGATAATTTATGCAACTGGAAAACCATGTTGCGGCACTGGGGTGAGACAAATTGGACGGATGATGAGTTTTATACTCCAACACCACCTACCATTACCAAAACATCTCTTTCGGCTTTATGA 1911 0.4296 MRGTMGASPHSVEARHRLPASIEDLYKRRLPRSKANAEKPFHLSVQDRSSRCKLSFLKFILLITISGTFVTLLYSPEVYNTNHLSSSGSRWIWGGADPRYISNVDTDWDDIQKITDKLTGQDELQGIGLVNFNKTEQVHWEHLIPDTTHVVLPLENAARNVTWESLYPEWIDEEEETEVPVCPSLPTLRSPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAALATSFKGNYPVYVLFITNCFPIPNLFTCKELVGREGNVWLYKPNLSVLREKVQLPVGSCELALPMRGKELAYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDFVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMNHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTLLFGAEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLQQFCLLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDRRLKKCIDNLCNWKTMLRHWGETNWTDDEFYTPTPPTITKTSLSAL* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1537 636 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 613 - -
Pvu9g1537 636 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 20 613 - -
Pvu9g1537 636 Pfam Glycosyl transferase family 8 310 516 IPR002495 GO:0016757
Pvu9g1537 636 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 302 551 IPR029044 -
Pvu9g1537 636 SUPERFAMILY Nucleotide-diphospho-sugar transferases 303 549 IPR029044 -
Pvu9g1537 636 CDD GT8_Glycogenin 304 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1537 Pvu-Chr9 21756649 21762903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1537 13 636 Glycosyltransferase AT3G18660 66.355 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1537 K20890 - gmx:100809361 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1537 9 21756649 21762903 Pvu9g1537 9 21756649 21762903 ECH
Pvu9g1537 9 21756649 21762903 Pvu2g2785 2 43592102 43592767 ECH
Pvu2g2785 2 43592102 43592767 Pvu9g1537 9 21756649 21762903 PCT