Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1516 ATGGTGTCCCTACCCATTTTCCATCAAACCCTTCTGCCATTACTCATCACTATCACAACTCTTTCCTTGGTTGCTTCCGATCCCACAGATGGCTTCACCCCTCTTTCATTTTCTAACTCCAACATCCAGATCCAAACGCCTTACGATGTTCCACAAAACCAGCGTTACAGCTATTCAAATGGAGTGCACAGATTTTGGGTATACTCCACGGACAAGCCTCACACGTCTAGCAGCCAAACAGCACCACGAAGTGAGATGCGTATCACAGGGTACGATTATTCATCTGGTGTGTGGCAATTTGAAGGGCATTTCTCCGTGCCCAGTGGGGTGTATGGTGGATCTCTCACTCATTACCAATCAGCTACTCTGGAACAAAACATCTACAATAAGTGGTATCGTTTCAACGTGATCCATGATGTGGGTGCCAACAACGTGAAGATTTTTATCAACGGGGTGAAGAAATTTGATGGAAATGGCCGTGGAGCCGGCAATCACTACTTCAAGTGTGGGGTTTACGCACAGAATGGTGCTTCCAACTACATGGAATCTCGATGGAGGGATATCAAGATTTTTAGAAAATACTAA 585 0.453 MVSLPIFHQTLLPLLITITTLSLVASDPTDGFTPLSFSNSNIQIQTPYDVPQNQRYSYSNGVHRFWVYSTDKPHTSSSQTAPRSEMRITGYDYSSGVWQFEGHFSVPSGVYGGSLTHYQSATLEQNIYNKWYRFNVIHDVGANNVKIFINGVKKFDGNGRGAGNHYFKCGVYAQNGASNYMESRWRDIKIFRKY* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1516 194 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 181 IPR013320 -
Pvu9g1516 194 PANTHER ALGINATE LYASE 110 193 - -
Pvu9g1516 194 PANTHER ALGINATE LYASE 10 109 - -
Pvu9g1516 194 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 110 193 - -
Pvu9g1516 194 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 10 109 - -
Pvu9g1516 194 Pfam Alginate lyase 128 191 IPR014895 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1516 - - pvu:PHAVU_009G146800g 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1516 9 21464094 21465806 Pvu9g1516 9 21464094 21465806 ECH