Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1512 ATGGCTTCGTTTCGGCGGACTCTTTCGCCGGCGTATCCCGATCGCCAGTACCTAAATGGTTCGTTTCCGGTGTCCTCTCCGACGCATAAGCTCTCCTCCGCGAACGCCAAGTACTCGTCGCCGCTGCCGGCGCTTGCAGCGGCGTTCCAGCAACTCGTCGGCGGCGTGTTCACTCGCCGGCACGGTCGGAAAGGGAAGTGGAGACGGGCGGCGTTCAGGTGCGTGCTGTGCTTCTTCGTAGGGTTCTTGCTAGGCATGTTCCCGTTTGGCCACATGGCGGAGGACATTCGGTCGAACGAAATGAAGCCGCCGCTGCCGCAGGCGAACAACGCGCAGCAGCTGCTCCAGGAAGATCGCGTTCTGCGGAATCGTGTCGAGGAGGGTTTCGTGATCGATCCGGTAAGCCTAAGCGCGGAGAGGGAGAGACAGAGCGTTAGGTTCGATTTTGTGCCGAGGAAGCCGCTGATTTTGGTGACACCGACGTACGACCGCGCCTTTCAGGCGTATTTCCTGAACCGGTTGGGACAGGTGCTGCGGCTGGTGCCGCCGCCAGTGGTGTGGATTGTGGTGGAGATGAAGGCGGCATCGATGGAGACGGCGGAGGTACTGAGGAAGACGGGCGTTATGTATAGACATTTAGTGTGCAATAAGAATTTGACGGATGTGAAGGACAGGGGGGTTCATCAGAGAAACACAGCGTTGGAACACATTGAGCGTCATAGGCTCGATGGGATTGTTTACTTTGCGGACGATGATAATGTGTATTCTCTTGAGTTGTTTGACTCCTTGAGAGACATCAGCCGCTTTGGTACTTGGCCTGTTGCCATGCTTGCGCCAAGCAAGAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATCGGATGGCATACAAATGAAAAAAGTAAGAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACTATGGCGGCGCCCTTCTTCAAATCCCATTAGACAGTTAGATACAGTGAAGGAAGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAGCTCAAATGGAAGGTTCACCTCATGGTTGTTCAAAAATAATGAATTGGCATCTCCATTTGGGTGCTCATAATATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCTGTCATACCTGTCAAGTAA 1221 0.5201 MASFRRTLSPAYPDRQYLNGSFPVSSPTHKLSSANAKYSSPLPALAAAFQQLVGGVFTRRHGRKGKWRRAAFRCVLCFFVGFLLGMFPFGHMAEDIRSNEMKPPLPQANNAQQLLQEDRVLRNRVEEGFVIDPVSLSAERERQSVRFDFVPRKPLILVTPTYDRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDSLRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKLWRRPSSNPIRQLDTVKEGFQETTFIEQLVEDEAQMEGSPHGCSKIMNWHLHLGAHNIVYPKGWVLQKNLDAVIPVK* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1512 406 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 153 397 IPR029044 -
Pvu9g1512 406 Pfam Glycosyltransferase family 43 174 381 IPR005027 GO:0015018|GO:0016020
Pvu9g1512 406 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 403 IPR005027 GO:0015018|GO:0016020
Pvu9g1512 406 PANTHER GLYCOSYLTRANSFERASES 1 403 - -
Pvu9g1512 406 CDD GlcAT-I 153 382 IPR005027 GO:0015018|GO:0016020
Pvu9g1512 406 SUPERFAMILY Nucleotide-diphospho-sugar transferases 154 399 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1512 Pvu-Chr9 21416549 21420683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1512 1 406 Glycosyltransferase AT1G27600 61.463 3.12e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1512 K20869 - gmx:100809892 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1512 9 21416549 21420683 Pvu9g1512 9 21416549 21420683 ECH