Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1493 ATGATTAAACGCAAGAAAAAACATAAAGACGAAGACATGTTTGGCAGGAAAGTACAGGGTTATCCGCTAAGTTATGGTAGAGCAGTTTGTGAATGTCTTCGTGGAGGACTTGATTTTATCAAAGATGATGAAAATGTGAATCCCCAACCATTTATGCGTTGGAGAGACTATTTCTTATTTTGTGCTGAAGCGATCTATAAAGCACAGACTCAAATAGGTGAAATCAATGCAACTGCGGGTACATGCGAAGAAATGATAAAAAGAGTTGTATTTGTCAGAGAATTAGGCGTTCCTATCGTAATGCATGATTATTTAACAGGGGGATTCACTGCAAATACTAGCTTGGCCCATTATTGTCGGGATAATGGTCTACTTCTTCATATACATCGTGCAATGCATGTAGTTATCGACAGACAAAATAATCATGGTATGCACTTTCGTGTCCTAACTAAAGCATTACGTTTGTTTGGTGGAGATCATGTTCACTCCGGTACCGTAATAGGTAAACTTGAAGGGGAAAGAGAAATCACTTCAGGTTTTGTTGACTTATTGTGTGATGATTTTATTGAAAAAGATCGAAGTCGTGGTATTTATTTCACTCAAGATTGGGTTTCTTTACCAGGTGTTCTGCCGGTTGCTTCAGGAGGTATTCACGTTTGGCATATGCCTGCTCTGACCGAAATCTTTGGAGATGACTTTGTACTTCAATTTGACGGAGGAACTTTAGGACACCCTTGGGGAAATGCACCAGGTGCGTACTAA 762 0.395 MIKRKKKHKDEDMFGRKVQGYPLSYGRAVCECLRGGLDFIKDDENVNPQPFMRWRDYFLFCAEAIYKAQTQIGEINATAGTCEEMIKRVVFVRELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHVVIDRQNNHGMHFRVLTKALRLFGGDHVHSGTVIGKLEGEREITSGFVDLLCDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDFVLQFDGGTLGHPWGNAPGAY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1493 253 Pfam Ribulose bisphosphate carboxylase large chain, catalytic domain 24 252 IPR000685 GO:0000287|GO:0016984
Pvu9g1493 253 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE, LARGE SUBUNIT-RELATED 24 252 - -
Pvu9g1493 253 SUPERFAMILY RuBisCo, C-terminal domain 24 252 IPR036376 GO:0000287
Pvu9g1493 253 ProSitePatterns Ribulose bisphosphate carboxylase large chain active site. 36 44 IPR020878 GO:0000287|GO:0015977|GO:0016984
Pvu9g1493 253 Gene3D - 17 253 IPR036376 GO:0000287
Pvu9g1493 253 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE 24 252 IPR033966 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1493 Pvu-Chr9 21101710 21103486 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1493 K01601 - mnt:21384458 435.261