Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1489 ATGGATGCTAAGTTCAGCATTGCCTTGTTTTTGTGTGTAGTTTGGGTAATGAGTGGCAATGCCACTGACCCTTGTGCCTCTCAACCGGATGAGTCCGACCTCAACGTCATTCCCATCTACAGCAAATGCTCACCGTTCAAGCCACCCAAGGCAGACTCCTGGGAGACCAGAATTGTAACCATGGCCTCAAAAGACCCACTCCGGGTCAGGTACTTGTCCACCTTGTTAGCTCAGAAGACCGTCTCCTCCGCCCCAATCGCTTCGGGCCAAGCCTTCAACATTGGTAACTACGTCGTCAGGGTCAAACTGGGAACCCCCGGTCAACTTTTGTTCATGGTTTTGGACACCAGCACCGACGAGGCCTTCGTCCCTTGCTCCGGCTGCACGGGCTGCTCTACCACCACCTTCTCCCCCAAAGCCTCCACCAGCTACAGCCCATTGGACTGCTCCGTACCCCAGTGCGGTCAGGTCCGTGGCCTTTCCTGCCCCGCCACAGGAACCGGCGCCTGCTCCTTCAACCAGTCCTATGCTGGCTCCTCTTTCTCCGCCACGCTCGTCCAAGACTCCTTCAGATTAGGAGCTGATGTTATCCCTAACTACTCCTTCGGTTGCGTCAACGCCATCACCGGAGCCTCAGTTCCGGCCCAAGGGCTTTTGGGTCTGGGTCGCGGCTCACTGTCGCTTCTCTCCCAGCCCGGGACAAACTACTCCGGTGTATTCTCTTACTGCCTCCCAAGCTTCAAATCGTACTACTTCTCCGGGTCGCTCAAACTCGGGCCTGTGGGCCAGCCCAAGAGCATCCGGACCACCCCGCTTCTGCGTAACCCCCACCGGCCTTCTCTTTACTACGTGAACTTCACTGGAATCAGCGTGGGGCGCGTCCTCGTACCTTTCCCCAGCGAGTATCTTGAGTTCAACCCATATAACGGATCCGGAACCATAATTGATTCGGGCACCGTGATAACTCGGTTCGTAGAGCCCGTGTACAACGCGGTGAGGGAAGAGTTCAGGAAGCAGGTGGGTGGCACGTTCTCGAGCATTGGAGCTTTCGACACATGTTTTGTGAAGACGTACGAAACACTGGCACCGCCAATTACCCTTCACTTCGAGGAATTGGACCTGAAGCTGCCATTGGAGAACAGCTTGATTCACAGCAGTGCCGGATCACTGGCTTGTCTTGCGATGGCGGCGGCGCCGGATAATGTGAACTCGGTTTTGAACGTAATTGCGAACTTTCAGCAACAGAATCTGAGGATTTTGTTTGATACCGTGAATAATAAGGTTGGCATAGCCCGTGAGGTTTGTAACTAA 1311 0.5484 MDAKFSIALFLCVVWVMSGNATDPCASQPDESDLNVIPIYSKCSPFKPPKADSWETRIVTMASKDPLRVRYLSTLLAQKTVSSAPIASGQAFNIGNYVVRVKLGTPGQLLFMVLDTSTDEAFVPCSGCTGCSTTTFSPKASTSYSPLDCSVPQCGQVRGLSCPATGTGACSFNQSYAGSSFSATLVQDSFRLGADVIPNYSFGCVNAITGASVPAQGLLGLGRGSLSLLSQPGTNYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNFTGISVGRVLVPFPSEYLEFNPYNGSGTIIDSGTVITRFVEPVYNAVREEFRKQVGGTFSSIGAFDTCFVKTYETLAPPITLHFEELDLKLPLENSLIHSSAGSLACLAMAAAPDNVNSVLNVIANFQQQNLRILFDTVNNKVGIAREVCN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1489 436 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Pvu9g1489 436 PANTHER ASPARTYL PROTEASE AED3 7 436 - -
Pvu9g1489 436 SUPERFAMILY Acid proteases 90 435 IPR021109 -
Pvu9g1489 436 Pfam Xylanase inhibitor N-terminal 97 259 IPR032861 -
Pvu9g1489 436 ProSiteProfiles Peptidase family A1 domain profile. 97 431 IPR033121 -
Pvu9g1489 436 Gene3D Acid Proteases 74 259 IPR021109 -
Pvu9g1489 436 Gene3D Acid Proteases 260 436 IPR021109 -
Pvu9g1489 436 PANTHER ASPARTYL PROTEASE-RELATED 7 436 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1489 Pvu-Chr9 21031439 21033715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1489 76 436 Miscellaneous Gene Families AT1G77480 25.495 1.32e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1489 - - gmx:100816307 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1489 9 21031439 21033715 Pvu9g1489 9 21031439 21033715 ECH