Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1485 ATGACCAACACAAATGCAGAATTGTCTCAGGGAAATGGTAGTGCTTCTTTTTGTTCTATTAACTCCCAATCTGGGTCACAAGACCATCCACAACGTTCTCCAAGTGGCACTGGCAATATGATTTTCAAAAGTGGACCACTTTTTATATCATCTAAAGGAATTGGATGGACATCTTGGAAGAAAAGATGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCCGAAGTGATCCAAATGCAATCCCTCAAAAGGGGAATGAAGTTAATTTGACCCTTGGAGGCATTGACCTCAACAATTCAGGCAGTGTTGTCATAAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCATGATGGACGAGCATTCACACTTAAGGCTGAAACTATGGAGGATTTATATGAGTGGAAGACTGCACTCGAAAATGCTTTAACACTGGCACCCAGTGCTACTAATGGAACGGAGCAAAATGGTATCTCCAGGAACGATCAGAATGATTCAATTGATATTTCTTTGGACCAGTTGAAAGATAGAGAACCAGCTAAATCTACTGTTATTGGTCGACCAATTTTACTTGCTTTGGAGGATGTTGATGGAACTCCATCATTTTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGAGCAAATGTGGAAGGAATCTTACGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGAGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGATGAGGATGCACATGTTATTGGAGACTGTATTAAGCATGTACTTCGCGAATTGCCATCTTCTCCAGTCCCCGCATCTTGTTGCAAGGCACTGTTAGAATCTTGTCGATCTGAGCGTGGTAGTAGGGTTGCTACTATGCGTGAAGCAATAAATGACACTTTCCCCGAACCAAATCGCCGCTTATTGCAAAGAATACTCATGATGATGCAAATTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGGCCCCTTTTGGCCGGAGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTATTCAACTTTTACAAGCTGCTGCTGCGGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAGGAATATAGCAGCATATTTGGGGAAGGTTCCATGTCCCCGGACATATACACTGATTCAGACGAAGATAGTGGATCTGAGAGTGAGCGGGCAACTGATGATGATTTGTCCTATGATGATGATGATGAAGAATATGATGAAGAAGAAGATTATGAGGAATCAATACATGATAGTGATGGAGATGGTGATCTTGGTAGTGAATCGTACACTGGAACTGAAGATTCAGAGGCCGATGATGCCCATGATGAGGAGCATGACCGTGCTAGTTCAAGTTCAAAATCCTCAGTTTTGACTGAAAAATCCAAAGCCACTCAAAAGTTAGCATCAAAGTCACTAGAACGCTCACTGGCTCAACAAAAAGATTTCAAAAGCTCTGAATATCTCACGAGTCCAAAGAAGACTGACTACGGTGATCAGTCCAATAAGCCTGTTGATAATGTTGGAGATGTTATTGATGAAGCTACATTGCTTAATTTAAATTCTCCTAGCCCTGCTTCATTTATAAAAAAATCCAATACCATGTCCAATGGCCCAGCACCTCGTCATCGCAACACATTGGGCCGCACCTCAGCAAGGAAGAATCTCTCCATGGAATCCATTGATTTTCCTATTGAAGAGGAGGATGAAATTGAAAGGCTTGAAGCTGCCAGGTCAGAATTACAAACTCAAATTGCAGAGCAGGTGAAGGCAAATGAAGAGGTGCAATCTCAAGTGGAGAATCAAAAGAAAGCCTTGGACGAGCGTCGTCTTTCTCTTGAGCAAGATGTTGCTAGACTACAGGAACAGTTGAACAAGGAAAAGAATTTTCGGGCAGCTCTTGAGAACAAAGCAGAGCTTGAAGCATTAGCTCTGGTAGAAGCAGATCTTGCCAATTTAGAGTCAAAGGTTGAGGAACTTGCGGCGAGGCTTAATGCACAAGTTAAGCAGAATATTGGAACTACTCCAGATTTCTCTAATCAACCACGACAAATGTCAAATCAAGAAAGAAGATTAAAATACAAGGCAGATGCTGAAGCTGCTGCCTCAACACAATCTGATAGATCAGGAAGTAAGGTTACGATAAGGACTCAACAAGACACTCATACAGTCGGAGCAGAAAGTGATACTGAGCGAAAGCCAGAGTCAACACCTTTACCAAATAAACACCCACCAAGTAGCTCCAAGCGATCTAGTTCAAAGGGCGAGGGAGCAAATTCCTCTCCTTCTGCACTCACAAAACTGACATCCAGACTGAACCTTTTGAAGGTGGCCCGAAATCAGATTGCAAATGAACTCCAAAACTTGGAAAAAGGGCGAGACTCAAGTCGCTCGTCGCACAATGTGGAAAAAGGAAAAGGATCTGAGCGTCATCAATCAATTCCATCCCCAAAAACATATGGAGGGTCTGAAATTCACTCTGTGCCAAACCCTGAAAAAGGTAAGGGGTCAGAATCATCTGACAAAGGATCAAGCAAAGGAAAATCATCTTATCAGAGTTCATCAGACAAACTGAAAAAATCGGACAGTCATCCGGCCCACCACCACACCGATGGATGGAATCAACAACCAAAACACTTGGAAAGAGGAAGGTCAGAAGGCCATCAGACTTATAATGTGGAGAAAGGCCGGTGA 2769 0.4229 MTNTNAELSQGNGSASFCSINSQSGSQDHPQRSPSGTGNMIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAIPQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETMEDLYEWKTALENALTLAPSATNGTEQNGISRNDQNDSIDISLDQLKDREPAKSTVIGRPILLALEDVDGTPSFLEKALTFIEEHGANVEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVIGDCIKHVLRELPSSPVPASCCKALLESCRSERGSRVATMREAINDTFPEPNRRLLQRILMMMQIVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSIQLLQAAAAANHAQAICITLLEEYSSIFGEGSMSPDIYTDSDEDSGSESERATDDDLSYDDDDEEYDEEEDYEESIHDSDGDGDLGSESYTGTEDSEADDAHDEEHDRASSSSKSSVLTEKSKATQKLASKSLERSLAQQKDFKSSEYLTSPKKTDYGDQSNKPVDNVGDVIDEATLLNLNSPSPASFIKKSNTMSNGPAPRHRNTLGRTSARKNLSMESIDFPIEEEDEIERLEAARSELQTQIAEQVKANEEVQSQVENQKKALDERRLSLEQDVARLQEQLNKEKNFRAALENKAELEALALVEADLANLESKVEELAARLNAQVKQNIGTTPDFSNQPRQMSNQERRLKYKADAEAAASTQSDRSGSKVTIRTQQDTHTVGAESDTERKPESTPLPNKHPPSSSKRSSSKGEGANSSPSALTKLTSRLNLLKVARNQIANELQNLEKGRDSSRSSHNVEKGKGSERHQSIPSPKTYGGSEIHSVPNPEKGKGSESSDKGSSKGKSSYQSSSDKLKKSDSHPAHHHTDGWNQQPKHLERGRSEGHQTYNVEKGR* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1485 922 MobiDBLite consensus disorder prediction 878 922 - -
Pvu9g1485 922 Coils Coil 596 695 - -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 697 712 - -
Pvu9g1485 922 Gene3D - 28 148 IPR011993 -
Pvu9g1485 922 SUPERFAMILY GTPase activation domain, GAP 202 395 IPR008936 GO:0007165
Pvu9g1485 922 MobiDBLite consensus disorder prediction 727 749 - -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 406 443 - -
Pvu9g1485 922 CDD RhoGAP 203 341 - -
Pvu9g1485 922 Gene3D Rho GTPase activation protein 171 394 IPR008936 GO:0007165
Pvu9g1485 922 MobiDBLite consensus disorder prediction 477 501 - -
Pvu9g1485 922 CDD PH 43 142 - -
Pvu9g1485 922 ProSiteProfiles Rho GTPase-activating proteins domain profile. 194 393 IPR000198 GO:0007165
Pvu9g1485 922 SMART PH_update 41 149 IPR001849 -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 400 532 - -
Pvu9g1485 922 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 4 820 - -
Pvu9g1485 922 Coils Coil 797 817 - -
Pvu9g1485 922 SUPERFAMILY PH domain-like 9 146 - -
Pvu9g1485 922 Pfam PH domain 43 146 IPR001849 -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 767 792 - -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 546 582 - -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 815 836 - -
Pvu9g1485 922 SMART RhoGAP_3 200 390 IPR000198 GO:0007165
Pvu9g1485 922 ProSiteProfiles PH domain profile. 40 147 IPR001849 -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 507 527 - -
Pvu9g1485 922 Pfam RhoGAP domain 203 346 IPR000198 GO:0007165
Pvu9g1485 922 MobiDBLite consensus disorder prediction 697 792 - -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 546 588 - -
Pvu9g1485 922 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 4 820 - -
Pvu9g1485 922 MobiDBLite consensus disorder prediction 811 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1485 Pvu-Chr9 21000240 21011017 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1485 - - vra:106760371 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1485 9 21000240 21011017 Pvu9g1485 9 21000240 21011017 ECH