Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1469 ATGGCAAAGCAGAAACTCATATACACTTTTTTGGTGTACTTGGTGATTCTCTTCTTCTTTGTTGCTTCCTCTGCTTCGGCTTCAGCGAGAGTTGCGCCTCTTTTGCAGAGCTACGGGAACCCCATTTTCGGATCAAACTTTCATTCTGTTTACGACACTTCCAAGTACGGTCCGCTTCAGCTGAGTAATGGATTGGCTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAGTGAAAGGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACCGGATTAGCTGATTTAGGTTATGTATATGTCAACATAGATGATTGCTGGTCTGCTGTGAGCAGAAATCAGAAGGGTCAACTTGTTCCTGATCCTAAGACATTTCCATCTGGAATCAAAGCTCTTGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCGGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCGATTTTCCATGAAACTGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAACTGTTACAATCTTGGTATCCCTCCCAAAAAACGTTATCCACCTATGCGTGATGCTCTCAATGCAACTGGACGTAAAATTTTCTACTCATTATGTGAATGGGGCATTGATAACCCTGCCTTGTGGGCAGACAAGGTAGGTAACAGCTGGCGCACAACTGAAGACATCAATGATTCGTGGGCAAGCATGACAACCATTGCCGATCTTAATGATAAATGGGCTGCATATGCTGGTCCTGGGGGATGGAATGACCCAGATATGTTGGAAGTTGGAAATGGTGGCATGACTTACCAGGAATACCGTGCTCACTTCAGCATCTGGGCTTTAGCGAAGGCACCACTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGGGCAATGAAGAAGTCATTGCCATCAATCAAGACTCACTTGGAGTCCAGGGAAGAAAAGTCCAAGTTGCTGGAGTAGATGGTTGTGGACAGGTTTGGGCTGGTCCTTTGTCAGGAAATCGATTGGTTGTTGCTCTCTGGAATCGGTGCTCAGAAGTTGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATCTGTGGCAGCACAAGTTAGTAACTGGAGATGCAGTATCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGTACATTTTCACTCCATTTATAGTTTCTCACTCTGTAGAGTAG 1302 0.4432 MAKQKLIYTFLVYLVILFFFVASSASASARVAPLLQSYGNPIFGSNFHSVYDTSKYGPLQLSNGLAKTPQMGWNSWNFFACNISERVIKETADALVSTGLADLGYVYVNIDDCWSAVSRNQKGQLVPDPKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKKRYPPMRDALNATGRKIFYSLCEWGIDNPALWADKVGNSWRTTEDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILGNEEVIAINQDSLGVQGRKVQVAGVDGCGQVWAGPLSGNRLVVALWNRCSEVATITASWEALGLESGVHVSVRDLWQHKLVTGDAVSSFSARVDIHDCQLYIFTPFIVSHSVE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1469 433 CDD GH27 69 331 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 Pfam Alpha galactosidase C-terminal beta sandwich domain 348 422 IPR041233 -
Pvu9g1469 433 Gene3D - 334 425 IPR013780 -
Pvu9g1469 433 SUPERFAMILY Glycosyl hydrolase domain 326 424 - -
Pvu9g1469 433 Pfam Alpha galactosidase A 68 331 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 63 82 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 99 114 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 140 161 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 174 191 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 201 219 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 266 285 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 PRINTS Glycosyl hydrolase family 27 signature 287 308 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 Gene3D Aldolase class I 61 333 IPR013785 -
Pvu9g1469 433 PANTHER ALPHA-GALACTOSIDASE 3 46 424 - -
Pvu9g1469 433 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 46 424 IPR002241 GO:0004553|GO:0005975
Pvu9g1469 433 SUPERFAMILY (Trans)glycosidases 61 331 IPR017853 -
Pvu9g1469 433 ProSitePatterns Alpha-galactosidase signature. 104 120 IPR000111 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1469 Pvu-Chr9 20791139 20802993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1469 1 431 Glycoside Hydrolase AT3G56310 70.602 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1469 K07407 - gmx:100784072 802.742