Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g1467 | ATGGATAATAAAAAAGAAAATTTGCTACCAACTCTACATAGCCAGCTGTTATCAATGGATGAGGAACTTTGGAATATGATTGAAGAGAGGGCCCAAGAGATACTATGGACAATTGAACCAAATTTATTATCTGAGGAGAACAGAAAGGATGTTATTCATTATGTTCGGAAGCTGATAGGAGATTACTATGGAGCACATGTTTTGCCATTCGGTTCTGTTCCACTAAAAACCTACCTTCCTGATGGAGATATTGACTTGACAGCTCTCAGTCCGGCAGATGCAGAGGATGATTTGGCATTAACAGTGTGCAGTATACTTGAAAGAGAAGATGACCCTGAATACCAGATAAAAGACATACAACATATACCTGCACAGGTTGACCAGCTTGTTGGAAAGAACCATCTTTTCAAACGCAGTATTGTCTTAATCAAAGCTTGGTGCTATTATGAAAGCCGAATACTTGGTGCACACCATGGACTGTTATCAACTTATGCCATAGAAATATTAGTCTTGTATATTGTCAATCGTTTTCATTCGTCACTGCGTGGTCCTCTAGAGGTTCTATACATGTTTTTGGACTACTACGGCTCATTTGACTGGGACAACAATTATGCTAGTATATGGGGTCCAAAAGCCTTATCCTCCCTTCCAGAAATTGTTGAAACACCAGAATGTGATCAGGGTGGATTCTTGTTCCAGAAAGATCTCCTCAGAAACTACAGGGATATGTGCTCTTTCAGCATAAGAGCATCCGAGAATGTGACTCCTGAATTTCCCGTTAAGCTCATGAACATCTTGGATCCTCTAAGAAATGATAACAACGTAGGTCGTTGCGTCAACTTAGCCAATTTACATCGAATAAGATTAGCTCTTTCCTATGGTGCACGAAAGCTCAAGCAGGTCCTCGCCCTTCCAGGAGAAAACATGGGTTCAGCACTTGAGAAGTTTTTCTTCTGTACTTTGGAAAGGAATGGGAAAGGAGAAAGGGCAGATGTTGACATTCCTGTTTGTCCATTTGGTACTGGAAGATCTGAAGGGTCTGTCTTGGATGGAGATTATGGCAGTTACTATTTTGACTTACAATGTGTTCAGCTATATCCTAATTATTCCATTCCAGTAACAACTGTACTTTCCAGTTCTCCATCTTCACCTTCTCATAGTGATATGTTTGCCATATCAACCCAGCAAAACTGGAGTGAAGGTGATTTCCTGACATTACAGCAAAACTGGAACATGTTTTATCAAAGTGGTAGAAATGTATACATCCCGAGACAGACACTGTATCATCCAACTTACAGCCTTGATGAAGGAGTAAAATCACGAGGAACAGGCACATATATACCTGACTTGAACTATAACTCCTACTGGGATATACGCACAAATGCGAACCAGCCAAGGGAAATTTCCTTTACAGAGAACAATGAATTGCCCAAATTTCCTACAGAGCAACTAGAGGAGGAGGTTCATTCTGAGACAAATTTGAATGCTGACTCAACGCCGTTTGAGATCACAAAAGAATACTTCCCCTTTCTTCCAGGCATTCCCAAGGCTACACTGCCAACACATGCACAAGGGCCAGCTCCATTAGCAAAGGCAAGTTCTGAGACAGACAAGGGTGGTGATTCGATGTTATCTGAGCTCTCAAGTGAAGATTTGTCCCCGCTTCTTCCATGCGTTCGCAATGATACACCACCAACACAAGCCCAAGACTCTACTCCATTGGAAAATGCTCATTCTGAGGCAGACATGGGTAGCAAATCGCAGTCTTTTGAACTCACAGATGAAGATTTCCCCCTTCTTCCAAAGGTTTGTTCGGAGACACACAAGGATGGCAAGTCAACATCGTTTGAGCTCTCAAAGAAAGATTTCCCTCTTCTTCAATCCTCTCAGAAGACTGTTCTGTCAGAGTCTGCAAAGTTAACCAAGCAAGCTAAGAGTTTCACATCCTCTAAACTGAACAATATGGAGTTTGGAACTCTAAAGTATTCACAATCACTGAAGGGACAAAGTTTGTCAACAAAGAGTAAGAAAGAAGATTGTGGTGTTTCATTATCTCAAAAAACTGTGATGGTAGTTCCGAATGTGGCAAGTCAGAGGAAACAGGAATCTTACCAAAGCAATAAGAAGATGGATTGA | 2136 | 0.4125 | MDNKKENLLPTLHSQLLSMDEELWNMIEERAQEILWTIEPNLLSEENRKDVIHYVRKLIGDYYGAHVLPFGSVPLKTYLPDGDIDLTALSPADAEDDLALTVCSILEREDDPEYQIKDIQHIPAQVDQLVGKNHLFKRSIVLIKAWCYYESRILGAHHGLLSTYAIEILVLYIVNRFHSSLRGPLEVLYMFLDYYGSFDWDNNYASIWGPKALSSLPEIVETPECDQGGFLFQKDLLRNYRDMCSFSIRASENVTPEFPVKLMNILDPLRNDNNVGRCVNLANLHRIRLALSYGARKLKQVLALPGENMGSALEKFFFCTLERNGKGERADVDIPVCPFGTGRSEGSVLDGDYGSYYFDLQCVQLYPNYSIPVTTVLSSSPSSPSHSDMFAISTQQNWSEGDFLTLQQNWNMFYQSGRNVYIPRQTLYHPTYSLDEGVKSRGTGTYIPDLNYNSYWDIRTNANQPREISFTENNELPKFPTEQLEEEVHSETNLNADSTPFEITKEYFPFLPGIPKATLPTHAQGPAPLAKASSETDKGGDSMLSELSSEDLSPLLPCVRNDTPPTQAQDSTPLENAHSEADMGSKSQSFELTDEDFPLLPKVCSETHKDGKSTSFELSKKDFPLLQSSQKTVLSESAKLTKQAKSFTSSKLNNMEFGTLKYSQSLKGQSLSTKSKKEDCGVSLSQKTVMVVPNVASQRKQESYQSNKKMD* | 712 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g1467 | 711 | SUPERFAMILY | PAP/OAS1 substrate-binding domain | 135 | 302 | - | - | |
| Pvu9g1467 | 711 | PANTHER | NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN | 541 | 684 | - | - | |
| Pvu9g1467 | 711 | PANTHER | NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN | 125 | 551 | - | - | |
| Pvu9g1467 | 711 | PANTHER | NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN | 1 | 126 | - | - | |
| Pvu9g1467 | 711 | Gene3D | - | 128 | 314 | - | - | |
| Pvu9g1467 | 711 | MobiDBLite | consensus disorder prediction | 518 | 592 | - | - | |
| Pvu9g1467 | 711 | SUPERFAMILY | Nucleotidyltransferase | 18 | 154 | IPR043519 | - | |
| Pvu9g1467 | 711 | MobiDBLite | consensus disorder prediction | 560 | 592 | - | - | |
| Pvu9g1467 | 711 | Gene3D | Beta Polymerase, domain 2 | 40 | 127 | IPR043519 | - | |
| Pvu9g1467 | 711 | PANTHER | PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY | 541 | 684 | - | - | |
| Pvu9g1467 | 711 | PANTHER | PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY | 1 | 126 | - | - | |
| Pvu9g1467 | 711 | PANTHER | PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY | 125 | 551 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g1467 | Pvu-Chr9 | 20777982 | 20782691 | Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g1467 | - | - | pvu:PHAVU_009G141900g | 1422.53 |