Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1445 ATGGACGGGACATCAATTGAGCATATATATCGATGCTACTCAGCTTCTTTTATTGAAAAGCCCCAAATTGAAAGTGGTGACAAAATTATAATGCCTCCATCGGCCCTTGTTCGTGTCGCATCTCTGCATATTGATTACCCAATGTTGTTTGAACCGCGTAATGATGCTGCTGAACGGGTTTCTCATTGTGATGTTCTTGAGTTCACTGCAGAGGAAGGCATGATATACATGCCATACTGGGTAGGCATTCCGAAGTAA 258 0.4264 MDGTSIEHIYRCYSASFIEKPQIESGDKIIMPPSALVRVASLHIDYPMLFEPRNDAAERVSHCDVLEFTAEEGMIYMPYWVGIPK* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1445 85 Gene3D - 2 82 IPR042299 -
Pvu9g1445 85 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 2 81 IPR004854 GO:0006511
Pvu9g1445 85 Pfam Ubiquitin fusion degradation protein UFD1 7 81 IPR004854 GO:0006511
Pvu9g1445 85 PANTHER UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG 2 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1445 Pvu-Chr9 20522207 20523515 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1445 K14016 - pvu:PHAVU_009G139700g 179.489