Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1442 ATGTGGAGGCCCTGTCCTTCAGAAGAGGAAGCAGAGGCACCAACGACGACACCACCGAACAACCTGATCCCGTCCCTCCCAGACGACGTCGCTCTGAACTGCATAGCACGCATCCCTCGCTCCCGCCACCCAACCCTATCCCTCGTTTCCAAACCCATCCGCACCCTCCTCTCTACCCCTCTCTTCTTCACCACGCGCTGCCTCCTCAACTGCACGCAACCCCTTCTCTACCTCACTCTCCGCACACCCGCCTCCTCCCTTCAGTGGTTCACGCTCCACCGCACAGTTCCTAGCCTCCTCCTAGCGCCTCTTCCCCCTATACCCTCCCCCGCCGTGGGCTCCGCCTACGCCGTCCTTGGCTCCACCATCTACGTCCTCGGCGGCTCCATCAACGACGTACCCTCCCCCCACGTCTGGCTCCTCGACTGCCGCTTCCACCGCTGGCTTCGGGGCCCAACCATGCGCGTAGCCCGGGAGTTTGCTGCCGCCGGGGTCATCGGCGGAAAGATCTACGTCCTCGGCGGCTGCGTCGCCGACACGTGGGCTCGCTCCGCCAATTGGGCGGAGGTCCTGGACCCCGACGTTGGGCGCTGGGAGAGGGTGGCCAGCCCCTCCGAGGTCCGGGAGAAGTGGATGCACGCCAGCGCGGTCGTCGGCGACAGGGTGTACGCGATGGCGGACCGTGGCGGCATCGCGTATGAGCCGCACAGCGGATCGTGGGAGAGCGTAGGGGGAGAATTGGACCTCGGGTGGAGAGGTAGAGCGTGCGTGGTGGAGGGTATTTTGTACTGCTACGACTATTTGGGGAAAATCAAAGGGTTCGATGTGGGGCGTGGGGTGTGGGAGGAGTTGAAGGGTTTGGAGAAGGGTTTGCCTCGGTTTCTGTGCGGGGCCACCATGGCTGATTTGGGTGGGAAGTTGTGTGTGGTGTGGGAGTGCCAAGGGAGTGGGAAAGAAATGGAAATTTGGTGCGCTGAGATTGGAGTGAAGAAGAATCCAGATGGGGAGCTGTGGGGTCAACTTGGTTGGTTTGGGCAGGTTCTCTCTGTTCCCAAAGGCTCCTCTGTTGTGCATTGTTCTTCTGTTGCCTTGTGA 1095 0.6192 MWRPCPSEEEAEAPTTTPPNNLIPSLPDDVALNCIARIPRSRHPTLSLVSKPIRTLLSTPLFFTTRCLLNCTQPLLYLTLRTPASSLQWFTLHRTVPSLLLAPLPPIPSPAVGSAYAVLGSTIYVLGGSINDVPSPHVWLLDCRFHRWLRGPTMRVAREFAAAGVIGGKIYVLGGCVADTWARSANWAEVLDPDVGRWERVASPSEVREKWMHASAVVGDRVYAMADRGGIAYEPHSGSWESVGGELDLGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGSGKEMEIWCAEIGVKKNPDGELWGQLGWFGQVLSVPKGSSVVHCSSVAL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1442 364 MobiDBLite consensus disorder prediction 1 24 - -
Pvu9g1442 364 Pfam Kelch motif 158 204 IPR006652 GO:0005515
Pvu9g1442 364 Pfam Kelch motif 111 155 IPR006652 GO:0005515
Pvu9g1442 364 SUPERFAMILY Kelch motif 88 345 IPR015915 GO:0005515
Pvu9g1442 364 SUPERFAMILY F-box domain 18 107 IPR036047 GO:0005515
Pvu9g1442 364 Gene3D - 76 341 IPR015915 GO:0005515
Pvu9g1442 364 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 14 347 - -
Pvu9g1442 364 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 14 347 - -
Pvu9g1442 364 SMART kelc_smart 169 221 IPR006652 GO:0005515
Pvu9g1442 364 SMART kelc_smart 122 168 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1442 Pvu-Chr9 20510399 20512123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1442 26 348 Miscellaneous Gene Families AT4G33900 37.607 4.74e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1442 - - gmx:100798508 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1442 9 20510399 20512123 Pvu9g1442 9 20510399 20512123 ECH