Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1432 ATGAAAGCCCTGTACAGAGGCTCTCTCTTTCTTAAATTCTTCATCACCTTACTCTTTATTGGGAGAGCTTCTTCTTCTCTACTTCCCACAACCAGAGACCCTTCTCAGCAACTCCTCAGCTTCAAAGCTTCTCTTCCCAACCCATCTCTGCTCCCCAACTGGCTCCCCAACCAAACCCCCTGTTCCTTCACCGGCATCACCTGCAACCAGACCCACCTCACTTCTATAGACCTCACCTCCATCCCTCTCAGTACCAACTTCTCCATTGTAGCCACCTACCTCCTCACCCTCGACCACCTCCAGTCCATCTCCCTCAAATCCACCAACCTTACCGGCCCTTCCACCATTCCTCTCTCTCATTCCAAGTGCACCTCTTCCCTAACCACCATAGATCTGTCCCAGAACACTCTCTCCGGTTCTCTCAGCGACATGTCCTTTCTTGCATCTTGTTCAAACCTTCAATCTCTCAACCTTTCTAGTAACCTTCTCGAATTCAACTCCTCGCACTGGAAACTCAACCTCCGCATCGCAGACCTCTCCAACAACAAGATTTCCGGTTCCGGCATCCTGCTCTGGCTTCTCAACCCCGACATCGAACACCTGGCGCTCAAAGGTAACAAAATCACTGGAGATACTGACTTCTCCGGTTCCACTTCTCTTCAGCACTTGGACCTTTCCTCCAACAACTTCTCGGTAGCTATTCCTTCCTTGGGCGAGTGTTCCTCGCTAAAATACTTGGACCTCTCTGCCAACAAATACTTTGGCGACATTGCACGCACTCTCTCCCCTTGCAAGACTCTCCTCTACCTCAACGTCTCCAGTAACCAGTTCTCCGGTCAGGTTCCTTCCCTCCCTCTTGGTTCTCTCCAGTTCGTCTACCTTGCTGCCAACCACTTCCATGGTCCGATTCCTCCTGCACTCGCAGACCTCTGCTCCACTCTCCTCCACCTGGATCTCTCTTCCAACAATCTCACTGGTGACTTCCCACGCGCCTTTGGCGCGTGCTCTTCCCTTCAATCCTTGGACATCTCGAGCAACCTCTTCTCCGGTGCGTTGCCCATGGAGGTTCTGACTCAAATGAGCAGTCTGAGGGAGCTTGCGGTGGCGTTCAACGAGTTTGGCGGTCCTCTCCCCGTGTCACTGTCGAAGCTTTCCAGTTTGGAATTGCTGGATCTGAGTTCCAACAACTTCAGCGGACCAATCCCTGGAACGCTGTGCGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAACCGGTTCATGGGTTTTATTCCTCCCACGCTCAGCAACTGTTCCAACCTTGTTGCCTTGGACTTGAGCTTCAACTTTCTGACGGGGACCATCCCTCCAAGTCTAGGGTCGCTCTCGAAGCTTCGGGACCTGATTATCTGGCTGAACCAGCTCCACGGTGAGATACCTCAGGAGCTGATGTATCTGAAGAACTTAGAGAATCTTATCCTGGATTTCAATGAGTTGAGTGGGAACATTCCCTCTGGCATCGTTAACTGCACCAAGCTCAATTGGATCTCTCTCTCCAACAACAGGCTAAGCGGCGAGATACCAGCCTGGATTGGGAAGCTTTCCAATCTGGCCATACTCAAACTCAGTAATAACTCCTTCTCCGGTCGTATTCCTCCGGAGCTTGGCGATTGCACTAGTCTGATATGGTTGGATCTGAATACTAACTCACTTACGGGTCCCATTCCGCCTGAGCTGTCCAAGCAGTCCGGGAATATTGCGGTGAATTTCATCAATGGAAAGACTTATGTGTACATAAAGAACGATGGGAGTAAAGAGTGTCATGGAGCCGGGAACTTGCTGGAGTTTGCCGGGATCAGTCAGCAGCAGCTCAACCGGATTTCCACCAAGAACCCCTGCAATTTCACTAGGGTTTATGGAGGTAAGTTACAGCCAACATTTAACCATAATGGTTCTATGATATTTTTGGATATCTCCCACAACATGTTGTCAGGCAGTATTCCGAAGGAACTTGGGGTCATGTACTATTTGACCATTCTCAATCTGGGACACAATAATGTGTCTGGGAGCATTCCTCAGGAGCTTGGGAAGATGAAGAATCTCAACATTCTTGATCTCTCCAATAATAGACTGGAAGGACAAATCCCGCAGAGTCTTACTGGACTCTCCTTGCTCACTGAGATTGACTTGTCCAACAACATGCTTTCCGGGACTATTCCTGAGACTGGTCAATTTGATACTTTCCCTGCGGCGAGGTTTCAGAACAATTCTGGTCTCTGTGGTGTTCCTCTGTCTCCATGTGGGTCGGACCCCGCAAACAGTGCTAGTGCGCAGCATATGAAGTCTCACCGGGGTCAGGCTTCTCTGGCCGGGAGTGTGGCCATGGGATTGCTGTTCTCCCTCTTCTGCATCTTTGGTTTGATCATGCGCAGCTTAGGTGGAGGGCAAAGAAGGCCTTCTTCTGGGGGGGCCAGAGCCATCA 2470 0.504 MKALYRGSLFLKFFITLLFIGRASSSLLPTTRDPSQQLLSFKASLPNPSLLPNWLPNQTPCSFTGITCNQTHLTSIDLTSIPLSTNFSIVATYLLTLDHLQSISLKSTNLTGPSTIPLSHSKCTSSLTTIDLSQNTLSGSLSDMSFLASCSNLQSLNLSSNLLEFNSSHWKLNLRIADLSNNKISGSGILLWLLNPDIEHLALKGNKITGDTDFSGSTSLQHLDLSSNNFSVAIPSLGECSSLKYLDLSANKYFGDIARTLSPCKTLLYLNVSSNQFSGQVPSLPLGSLQFVYLAANHFHGPIPPALADLCSTLLHLDLSSNNLTGDFPRAFGACSSLQSLDISSNLFSGALPMEVLTQMSSLRELAVAFNEFGGPLPVSLSKLSSLELLDLSSNNFSGPIPGTLCGDAGNNLKELYLQNNRFMGFIPPTLSNCSNLVALDLSFNFLTGTIPPSLGSLSKLRDLIIWLNQLHGEIPQELMYLKNLENLILDFNELSGNIPSGIVNCTKLNWISLSNNRLSGEIPAWIGKLSNLAILKLSNNSFSGRIPPELGDCTSLIWLDLNTNSLTGPIPPELSKQSGNIAVNFINGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTKNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKELGVMYYLTILNLGHNNVSGSIPQELGKMKNLNILDLSNNRLEGQIPQSLTGLSLLTEIDLSNNMLSGTIPETGQFDTFPAARFQNNSGLCGVPLSPCGSDPANSASAQHMKSHRGQASLAGSVAMGLLFSLFCIFGLIMRSLGGGQRRPSSGGARAI 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1432 823 Pfam Brassinosteroid receptor island domain 580 644 IPR045381 -
Pvu9g1432 823 SUPERFAMILY RNI-like 55 304 - -
Pvu9g1432 823 Pfam Leucine rich repeat 289 347 IPR001611 GO:0005515
Pvu9g1432 823 Pfam Leucine rich repeat 673 731 IPR001611 GO:0005515
Pvu9g1432 823 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515
Pvu9g1432 823 Pfam Leucine Rich repeats (2 copies) 218 257 IPR025875 -
Pvu9g1432 823 PRINTS Leucine-rich repeat signature 314 327 - -
Pvu9g1432 823 PRINTS Leucine-rich repeat signature 694 707 - -
Pvu9g1432 823 Pfam Leucine rich repeat N-terminal domain 36 69 IPR013210 -
Pvu9g1432 823 SMART LRR_typ_2 530 554 IPR003591 -
Pvu9g1432 823 SMART LRR_typ_2 694 717 IPR003591 -
Pvu9g1432 823 SMART LRR_typ_2 218 240 IPR003591 -
Pvu9g1432 823 SMART LRR_typ_2 718 741 IPR003591 -
Pvu9g1432 823 SMART LRR_typ_2 482 506 IPR003591 -
Pvu9g1432 823 SMART LRR_typ_2 412 434 IPR003591 -
Pvu9g1432 823 SMART LRR_typ_2 384 408 IPR003591 -
Pvu9g1432 823 Pfam Leucine Rich Repeat 436 458 IPR001611 GO:0005515
Pvu9g1432 823 Pfam Leucine Rich Repeat 412 434 IPR001611 GO:0005515
Pvu9g1432 823 SUPERFAMILY L domain-like 244 752 - -
Pvu9g1432 823 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Pvu9g1432 823 Gene3D - 585 645 - -
Pvu9g1432 823 PANTHER SYSTEMIN RECEPTOR SR160-LIKE 10 671 - -
Pvu9g1432 823 PANTHER SYSTEMIN RECEPTOR SR160-LIKE 673 715 - -
Pvu9g1432 823 PANTHER SYSTEMIN RECEPTOR SR160-LIKE 716 806 - -
Pvu9g1432 823 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 716 806 - -
Pvu9g1432 823 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 671 - -
Pvu9g1432 823 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 673 715 - -
Pvu9g1432 823 Gene3D Ribonuclease Inhibitor 38 763 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1432 Pvu-Chr9 20367117 20369586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1432 36 805 Receptor kinase-like Gene Family AT4G39400 61.509 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1432 K13415 - gmx:100799772 1305.04