Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1417 ATGGCTTCGGAGAAAATCGAGCGAACTGCAATTGAAATGAACAATGCGGATACAAATTCGAGGGAACGTTCTTCTCTTCCTCCGTTGCAAAATTCACCCAATACTCAAAATCTGGGAATCATAGAACGAACTTTCTCCGCCGCAGGCGCCGCCTTCCTTTCAGTCATCATTGCCAATCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCACAAGCAGCAGGGGTTGCATATTCTCATCCACTCAGTAATATGACTAGTAGAATGGCTTGTTTTGGCCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCATCATGCCACCGGGCTGGAATCCAGGGAACAGTGTCCATCTGTCCTCCTGAGTGTTTTCGCTACAAAGGAACATTGGATGTCATCCACAAAATTATACATCAGGAGGGATTTGCTAAGCTGTGGAGAGGCACAAATGCTGGTCTGGCTCTTGCAGTACCAACTGTGGGAATTTACCTTCCTTGCTATGACATATTACGCAATTGGTTGGAGGATTTCACAGCTAAAAATGCTCCAACTACAGCTCCTTATGTACCATTAGTGGCTGGTTCATTGGCACGCTCTCTAGCTTGTGCAACTTGCTATCCTATTGAACTTGCTAGAACTCGAATGCAGGCATTTAAAGTGACTCAAATTGATAAAAAGCCTCCTGGAGTGTTTCAGACTCTGCTTGGTGTTATGTCGCATGTCAAAAGCATAAATAGTCCACAGAATAATTTGCAAGGTTATCGACTTTTATGGACTGGCATGGGAGCTCAACTTGCCCGTGATGTACCCTTCTCTGCCATTTGTTGGTCAACGCTTGAACCGACTAGAAGAAAACTTCTTAGTTTTGTTAGACATGATGATGCCAATGCGTTTAGTGTTCTTGGCGCAAATTTCGGAGCTGGTTTTATTGCAGGAACTTTAGCAGCTGGAGCTACATGTCCTTTAGATGTTGCAAAGACTCGGAGGCAAATAGAGAAGGATCCTTTCAAGGCATTGAAAATGACTACAAGACAAACATTAACGGAGGTGTGGAGAGATGGAGGCTTGAAAGGATTGTTTGCAGGTTTTGGTCCACGAGTTGGTCGATTAGGTCCTTCCGTTGGATTAGTGGTTTCATTTTATGAAGTTGCAAAGTTTGTTCTGCATCATCACTACAACACATCATCATGA 1188 0.4377 MASEKIERTAIEMNNADTNSRERSSLPPLQNSPNTQNLGIIERTFSAAGAAFLSVIIANPLDVAKTRLQAQAAGVAYSHPLSNMTSRMACFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVIHKIIHQEGFAKLWRGTNAGLALAVPTVGIYLPCYDILRNWLEDFTAKNAPTTAPYVPLVAGSLARSLACATCYPIELARTRMQAFKVTQIDKKPPGVFQTLLGVMSHVKSINSPQNNLQGYRLLWTGMGAQLARDVPFSAICWSTLEPTRRKLLSFVRHDDANAFSVLGANFGAGFIAGTLAAGATCPLDVAKTRRQIEKDPFKALKMTTRQTLTEVWRDGGLKGLFAGFGPRVGRLGPSVGLVVSFYEVAKFVLHHHYNTSS* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1417 395 PANTHER FI19922P1-RELATED 29 394 IPR045315 GO:1990542
Pvu9g1417 395 PANTHER BNACNNG35730D PROTEIN 29 394 - -
Pvu9g1417 395 Gene3D Mitochondrial carrier domain 112 391 IPR023395 -
Pvu9g1417 395 MobiDBLite consensus disorder prediction 12 34 - -
Pvu9g1417 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 172 IPR018108 -
Pvu9g1417 395 SUPERFAMILY Mitochondrial carrier 39 381 IPR023395 -
Pvu9g1417 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 386 IPR018108 -
Pvu9g1417 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 284 IPR018108 -
Pvu9g1417 395 Gene3D Mitochondrial carrier domain 16 111 IPR023395 -
Pvu9g1417 395 MobiDBLite consensus disorder prediction 1 34 - -
Pvu9g1417 395 Pfam Mitochondrial carrier protein 38 174 IPR018108 -
Pvu9g1417 395 Pfam Mitochondrial carrier protein 187 285 IPR018108 -
Pvu9g1417 395 Pfam Mitochondrial carrier protein 302 388 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1417 Pvu-Chr9 20120662 20129547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1417 134 385 Organic Solute Cotransporters AT3G55640 27.413 4.75e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1417 K15119 - gmx:100778501 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1417 9 20120662 20129547 Pvu9g1417 9 20120662 20129547 ECH