Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1405 ATGCCACCAGCAGTGTCATCTGCTTTTGAGTCAGAGAGAGCCCCTGTGATATATGTGCATACAGTTTCAGAGGCTGGTCGCCTTCTTCCTTCAGCTAGCCAATGGAACTCCATAGCACTTGATTTTAAACTTGCTCCTCACTCTTCCACCGCCTATGAATCTATCCCTTCTCAATACCCAAAATCTGTTGACTACGATCTTGTCATCACTGACAGGAAGCACTTTCATTGTTTTATTTTTGTTCTTGTAACAATAATTTTAGCCATCCTAGCAGCTGTTCTATTGGTGTATTTTTTACCTCAGAAGCACAAGCATCAAGGGTCTTCAATCAATCTCAAAGTGGCAATAAACCAGGCTCTAACATTTTATGATGCCCAAAAATCTGGACATTATCCAAGCAACAGTCCAGTGAAATTTCGAGGAGATTCAGGATTACAAGATGGGGATTCGGCTAACACTGATCTTACTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTTACCACAGCTTATACAATGACCTTGTTGAGTTGGACTGTCATGGAATATCAAAGTAAATATGCTGATATTGGTGAACTTGATCATGTTAGGGACATCATTAGATGGGGTAGTGACTACCTTCTCAAGGTTGGAAGTACCATCAGAATTAACAATGAACATAGTGATTTGAGTTGCTGGCAACGGCCCGAAGATATGAAATATGAGAGATCAGTTTCAATTTGCGATGGCTCTGCTACAGATTTAGCTGGTGAAATCGTGGCAGCATTATCTGCAGCATCGATGGTATTCAAGGACGACAGAGATTACTCAAAGAGACTTGTGGAGGCAGCAGAAAGGCTGTTTGGGGCAATACCTGCAAAACAAGGGACTTACACCATGGTTGATGGATGTGGAAAACAAGCAAGAATGCTTTATAACTCAACCAGCTACCAAGATGAGTTGGCTTGGGGAGCAACATGGTTATTTCTTGCTACTGAAGACACTAATTACCTTGCAACTGCAACTGAAACTTTTTTTTCAGCCAAGGGTAATGAATCAAGCGTTGACAAAGGAGTTGTTTACTGGAATAACAAGCTCAATGCTGTGGAGGTTTTGCTAACCGGTATTCGATATTTCCGTGATCCTGGTTTCCCATATGAGGATGCTTTGAAACTTTCATCTAACTTAACCGAGGCCCACATGTGTTCTTATCTATTCAGTAAATACTTTAGCAGGACACCTGGTGGATTGATTATCCTGAAACCTGATAATGAACCATTACTCCAGTTTGCTGCTACAGCATCTTTTCTCAGTAAATTATACAGCGATTACCTGGATCATCTCAAAATGTCTGGTGCAAGTTGCGAGACTGATTCATTCTCTGTGAAAATGCTTCGTGATTTTGCCACTTCTCAGGTTAACTACATCTTGGGGCAGAACCCTATGAAAATGAGTTATTTAGTGGGCTATGGTGACAGGTATCCTGTCCAAGTTCATCATAGAAGTGCATCAATCCCTTGGAATAACCAACCTTACAATTGTGACGATGGTAAGAGATGGCTAAACTCTAAAGATCCAAATCCGCAGGTTCTTTTGGGAGCCATGGTGGGAGGACCAGACACTAATGACAATTTCATGGATCAGAGGACCAACCAAAGGTTCACTGAACCGAACATAGCCAGCAATGCAGGCTTAGTTGCAGCACTGATTGCGCTTCAAGATCCTCCTTATAATTCACGTGACGTAAAAAGCACATTGTGGGGATGGACTTGA 1761 0.4168 MPPAVSSAFESERAPVIYVHTVSEAGRLLPSASQWNSIALDFKLAPHSSTAYESIPSQYPKSVDYDLVITDRKHFHCFIFVLVTIILAILAAVLLVYFLPQKHKHQGSSINLKVAINQALTFYDAQKSGHYPSNSPVKFRGDSGLQDGDSANTDLTGGFYDSGNNIKFTFTTAYTMTLLSWTVMEYQSKYADIGELDHVRDIIRWGSDYLLKVGSTIRINNEHSDLSCWQRPEDMKYERSVSICDGSATDLAGEIVAALSAASMVFKDDRDYSKRLVEAAERLFGAIPAKQGTYTMVDGCGKQARMLYNSTSYQDELAWGATWLFLATEDTNYLATATETFFSAKGNESSVDKGVVYWNNKLNAVEVLLTGIRYFRDPGFPYEDALKLSSNLTEAHMCSYLFSKYFSRTPGGLIILKPDNEPLLQFAATASFLSKLYSDYLDHLKMSGASCETDSFSVKMLRDFATSQVNYILGQNPMKMSYLVGYGDRYPVQVHHRSASIPWNNQPYNCDDGKRWLNSKDPNPQVLLGAMVGGPDTNDNFMDQRTNQRFTEPNIASNAGLVAALIALQDPPYNSRDVKSTLWGWT* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1405 586 PANTHER ENDOGLUCANASE 26 580 - -
Pvu9g1405 586 SUPERFAMILY Six-hairpin glycosidases 110 569 IPR008928 GO:0005975
Pvu9g1405 586 PANTHER ENDO-1,4-BETA-GLUCANASE 26 580 - -
Pvu9g1405 586 Pfam Glycosyl hydrolase family 9 115 565 IPR001701 GO:0004553|GO:0005975
Pvu9g1405 586 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 471 497 IPR018221 -
Pvu9g1405 586 Gene3D - 109 571 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1405 Pvu-Chr9 19950277 19952651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1405 61 568 Glycoside Hydrolase AT5G49720 44.030 7.93e-139 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1405 K01179 - gmx:100805472 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1405 9 19950277 19952651 Pvu9g1405 9 19950277 19952651 ECH