Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1385 ATGGCCCTGGAGAAGTGTTTAACAGTAGGCACAGCCACACCCCAATGCCTTTCTCCGTGCTTTCCAACTTCAAGGGAAAAGCTTGTTTTCCCAACCCACAGAGGTTTCAAGAAATCCATGCCGAACGCAAAACTCTCATACCAATCTCTCTATTCAACCTACCGAAAATCCCGTTTTGTTTGCAATGCTCGTGAAGCAGTAAATGAAGTAAAAGAGGTGACTGACGCAAACTGGAATCAACTTGTGATTGCCAATGAAACCCCTGTTCTGGTAGAGTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCACCTGTTATTGAAGAGTTAGCGAAGGAATATGGTGAAAAACTTGCATGCTACAAGCTTAACACAGATGACTCCCCAAACACAGCAACTCAGTACGGCATCAGAAGCATACCAACAGTTCTGTTCTTCAAGAATGGAGAGAAAAAAGAAAGCATAATTGGTGCAGTTCCCAAGTCTACTCTGTCAGCGACAGTTGAAAAATATATTGATTTATAA 528 0.4318 MALEKCLTVGTATPQCLSPCFPTSREKLVFPTHRGFKKSMPNAKLSYQSLYSTYRKSRFVCNAREAVNEVKEVTDANWNQLVIANETPVLVEFWAPWCGPCRMIAPVIEELAKEYGEKLACYKLNTDDSPNTATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATVEKYIDL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1385 175 PRINTS Thioredoxin family signature 89 97 - -
Pvu9g1385 175 PRINTS Thioredoxin family signature 97 106 - -
Pvu9g1385 175 PRINTS Thioredoxin family signature 137 148 - -
Pvu9g1385 175 PANTHER THIOREDOXIN M-TYPE PROTEIN 23 173 - -
Pvu9g1385 175 PANTHER GEO12009P1 23 173 - -
Pvu9g1385 175 CDD TRX_family 76 170 - -
Pvu9g1385 175 TIGRFAM thioredoxin: thioredoxin 74 172 IPR005746 GO:0015035
Pvu9g1385 175 SUPERFAMILY Thioredoxin-like 58 174 IPR036249 -
Pvu9g1385 175 Gene3D Glutaredoxin 69 174 - -
Pvu9g1385 175 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Pvu9g1385 175 Pfam Thioredoxin 70 170 IPR013766 -
Pvu9g1385 175 ProSiteProfiles Thioredoxin domain profile. 39 174 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1385 Pvu-Chr9 19711888 19713595 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1385 K03671 - gmx:100500292 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1385 9 19711888 19713595 Pvu9g1385 9 19711888 19713595 ECH