Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1378 ATGGAGATTGAAGTCCCTGTTGTGATTGTGGGAGCAGGCCCTGCTGGCCTTGCAACCTCTGCATGTCTCAACAAACTATCCATCCCCAACCTTGTCCTCGAAAGAGATGATTGTCATGCATCTCTTTGGAGGAAAAGGACATATGACCGCTTGAAGCTCCACTTAGGCAAAGATTTCTGCAGCCTCCCTCACATGCCCTTTCCTTCTGATTTCCCCACCTTTGTCCCCAGGATTCACTTCCTGCGTTACTTGGATAACTATGTCAGCCGTTTCAAGATTTCCATCCGTTATAATCGGAGTGTAGAATCTGCATATCTTGATGACATAAATGGAAAATGGAGGATTGTTGTCAAGGACACAGCATCTAAGGAGGATGCTGTTGAGGTTTACGTGGCTGAGTTTCTGGTAGTTGCATGTGGGGAGAATAATGAAGGGTATGTGCCTAGGGTTGAAGGGCTTGAAGGGTTTGAAGGAGAATACCTGCATTGCAGCAAGTATTTCAATGGAAGGGACATGTATGGTAAAAATGTCCTTGTTGTTGGCTGTGGTAATTCAGGCATGGAGATCGCTTATGATCTCTCAAATTGGGGTGCTAATACTTCCATTGTTATTAGAGGCCCTGTTCACTTTTTCACTAAAGAAATGGTGTTCCTGGGAATGACCTTGCTGAAATACTTAAAAATGGAGAATGTGGACAAGCTTATGATGCTTATGAGCAAGATGAAGTACGGAGACATGTCTAAGTATGGTTTGGTGAGGCCAAAGGATGGACCCTTCCTTTTGAAGAAAAAGGGTGGTACTACCCCTACCATTGATGTTGGTTGTGTTCCTTTGATCAAGAGAGGCGAAATAAAGGTTTTTTCAACTATTTCAAGAATCAATGAGGGCAAGATGGTTGAGTTTGAGGATGGAAAAGATGGAGAATTTGACATCATCATCTTTGCTACTGGATACAATAGCACTGTGCTGAATTGGCTTAAGGATTATGAAGGACTGTTCAATGGTAATGGAATGCCTAAACCAGGTTTTCCAAATCACTGGAAGGGAGAAAATGGTCTCTACTGCGCTGGATTTTCAAGAAGGGGATTAGATGGCATTGCTTTTGATGCGCGGCGTATAGCTGATGACATCCGTATGACTACAAGTGCTAGAGACTTACCTGAAACCAACTTTGCTGGTCTCAAACTCTTACAAAAATAA 1200 0.4308 MEIEVPVVIVGAGPAGLATSACLNKLSIPNLVLERDDCHASLWRKRTYDRLKLHLGKDFCSLPHMPFPSDFPTFVPRIHFLRYLDNYVSRFKISIRYNRSVESAYLDDINGKWRIVVKDTASKEDAVEVYVAEFLVVACGENNEGYVPRVEGLEGFEGEYLHCSKYFNGRDMYGKNVLVVGCGNSGMEIAYDLSNWGANTSIVIRGPVHFFTKEMVFLGMTLLKYLKMENVDKLMMLMSKMKYGDMSKYGLVRPKDGPFLLKKKGGTTPTIDVGCVPLIKRGEIKVFSTISRINEGKMVEFEDGKDGEFDIIIFATGYNSTVLNWLKDYEGLFNGNGMPKPGFPNHWKGENGLYCAGFSRRGLDGIAFDARRIADDIRMTTSARDLPETNFAGLKLLQK* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1378 399 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 4 384 - -
Pvu9g1378 399 SUPERFAMILY FAD/NAD(P)-binding domain 7 233 IPR036188 -
Pvu9g1378 399 SUPERFAMILY FAD/NAD(P)-binding domain 173 383 IPR036188 -
Pvu9g1378 399 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Pvu9g1378 399 PRINTS FAD-dependent pyridine nucleotide reductase signature 176 194 - -
Pvu9g1378 399 Pfam Flavin-binding monooxygenase-like 7 319 IPR020946 GO:0004499|GO:0050660|GO:0050661
Pvu9g1378 399 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Pvu9g1378 399 PRINTS Pyridine nucleotide disulphide reductase class-II signature 172 196 - -
Pvu9g1378 399 Gene3D - 4 385 IPR036188 -
Pvu9g1378 399 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1378 Pvu-Chr9 19629643 19631506 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1378 K11816 - gmx:100801203 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1378 9 19629643 19631506 Pvu9g1378 9 19629643 19631506 ECH