Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1374 ATGGCATCGTGGTTCTTGCAAAGGTCTAGAATCTTCTTCTCTACTCATCAACACAGCAAGCCATTCTTCTTACTACCATTTCTTAACAACACCTCTTCTTCCTTCTCTAGACCAAGAACACTGCCTCACAAAAACTCACCTACCCTTTTCTCCTTCTCACGTCATGAATCAACCAAAGCTGATGCACAACTGGAACTGGAGCATGATTTCACCCAGGATCACACTAATCAGGAGATTGATTTTCCTGGAGGGAAAGTTGGATTTACTTCTGAAATGAGATTCATTTCCATGTCTGCTTCCAAAAGGGTGCCGTGTTATCGTGTTCTTGATGACAATGGTGAGCTGGTTAAAGACAGCAACTATGTGCAGGTTAGCAAGGAAATGGGTGTGAAGATGTATTCTGACATGGTCACTCTTCAAACTATGGACAACATATTCCATGAAGTGCAGAGGCAAGGTAGAATTTCCTTCTACGTCACCCAAATGGGGGAAGAAGCAGTTAACATTGCATCTGCAGCTGCACTTGCTCCCGATGATATCATATTGCCTCAGTACCGAGAACCTGGAGTTCTACTGTGGCGTGGTTTTACACTGCAACAATTTGTTCATCAGTGCTTTGGAAACACTCATGATCTGGGGAAAGGCAGGCAGATGCCTATACATTATGGATCAAACCAGCACAATTACTTCACAATCTCATCCCCCATAGCAACTCAACTTCCTCAAGCTGTGGGAGCTGCTTATTCTCTTAAAATGGATGGCAAGAGTGCATGTGCAGTCACTTATTGTGGGGATGGTGGGACCAGTGAGGGAGATTTTCATGCTGGCATGAATTTTGCAGCAGTGATGGACGCCCCTGTTATTTTTATCTGTCGAAACAATGGGTGGGCCATCAGTACACCAGTAGAAGAACAATTTCGAAGTGATGGAGTTGTAGTGAAAGGTAAAGCTTATGGCATCTGGGGTATCAGAGTAGATGGAAATGATGCTCTTGCAGTTTATAGTGCAGTCCACACTGCTAGAGAAATCGCTATAAGAGAAAAAAGGCCTGTTTTAATTGAGGCTCTCACTTATAGAGTAGGACATCACTCTACATCTGATGATTCAACTAAGTACCGGGCAATTGATGAGATTGAATATTGGAAGATGAGAAGGAATCCTGTGAGTAGATTCAAGAGATGGGTGGAAAAGAATGGTTGGTGGAGTGACAAGGAAGAATTGGAGCTTAGAAGCAGTATTAGGAAGCAGCTATTACATGCGATTGAGGTGGCAGAGAAAGCACAAAAACCTCCACTTGAGGACATGTTTAATGATGTCTATGACAAACTGCCACCAAACCTTGAGGAGCAAGAGAGATTACTTAGGAAATCGATCAAGAAGCATCCCAAAGACTACCCTTCTGATGTTCCTTTGTAG 1416 0.4322 MASWFLQRSRIFFSTHQHSKPFFLLPFLNNTSSSFSRPRTLPHKNSPTLFSFSRHESTKADAQLELEHDFTQDHTNQEIDFPGGKVGFTSEMRFISMSASKRVPCYRVLDDNGELVKDSNYVQVSKEMGVKMYSDMVTLQTMDNIFHEVQRQGRISFYVTQMGEEAVNIASAAALAPDDIILPQYREPGVLLWRGFTLQQFVHQCFGNTHDLGKGRQMPIHYGSNQHNYFTISSPIATQLPQAVGAAYSLKMDGKSACAVTYCGDGGTSEGDFHAGMNFAAVMDAPVIFICRNNGWAISTPVEEQFRSDGVVVKGKAYGIWGIRVDGNDALAVYSAVHTAREIAIREKRPVLIEALTYRVGHHSTSDDSTKYRAIDEIEYWKMRRNPVSRFKRWVEKNGWWSDKEELELRSSIRKQLLHAIEVAEKAQKPPLEDMFNDVYDKLPPNLEEQERLLRKSIKKHPKDYPSDVPL* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1374 471 Pfam Dehydrogenase E1 component 136 431 IPR001017 GO:0016624
Pvu9g1374 471 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 103 466 IPR029061 -
Pvu9g1374 471 CDD TPP_E1_PDC_ADC_BCADC 132 424 - -
Pvu9g1374 471 Gene3D - 74 469 - -
Pvu9g1374 471 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 1, MITOCHONDRIAL-LIKE 24 471 - -
Pvu9g1374 471 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 24 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1374 Pvu-Chr9 19539774 19545734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1374 1 308 Acyl Lipid Metabolism Gene Families AT1G21400 60.559 9.56e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1374 K00166 - gmx:100796766 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1374 9 19539774 19545734 Pvu9g1374 9 19539774 19545734 ECH