Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1358 ATGGATTCAAGTTTATTGCTATCAGAAGTTGATGCTGTGCCCCACTTGCCCACGAATTTCATTTGGCCTAATGAGTACTTGGTGGATGTCCAAGGCGAGCTCCAAGCACCAGTAGTGGACCTTGATGGGTTTCTGAGAGGGGACCAAGAGGCCACACAGTATGCTGCCAAACTCATAAGGGAAGCCTGCTTAAACCATGGTTTTTTCCAAGTGATCAACCATGGCGTTGATTCACGTCTCATTCGTGAAGCACATAGTCAAATTGACACTTTCTTTAAGCTCCCAATTCACAGGAAATTGAGTGTTCAGAAGACACCAGCTTCCATGTGGGGCTACTCTGGTGCACATGCTCATCGCTTCTCCTCCAAATTGCCATGGAAGGAAACCCTCTCTTTCCCCTACCATGAAAACACCTTAGAACACGTTGTAACCAACTACTTTAAGTCCACCATTGGAGAAGACTTTGAACAAGCTGGAGTGATATTCCAGAAGTACTGTGATGGTATGAAGCAGTTGGGGTTGAAGCTGGTGGAGCTATTGGCCATAAGCTTAGGCGTGGATCGGTTGCATTACAGAGAGTTGTTCTCAGATGGATGCTCCATCATGAGATGCAACAACTACCCATCTTGCCAACAACCGAGCCTTACATTGGGAACAGGACCACATTGTGATCCAACGTCTATAACCATACTTCACCAAGATCTTGTTGGGGGGCTTCATGTTTTTGCAGACAAGAAGTGGAAGACGGTTCAACCTCGCCTTGATGCCCTTGTAGTCAACATTGGAGACACCTTCACGGCATTATCAAATGGGAGATACAAAAGTTGCCTGCATAGGGCTGTGGTTAACAAGTACAAGGAGAGGAAGTCGTTGGCGTTCTTTCTATGCCCCAAAGAAGACAAGGTGTTGAGAGCCCCAGATAGTGTTGTCGGCATGGATGGAACGAAACAGTATCCCGATTTTACATGGTCAGATTTGCTTCAGTTCACACAAAACCACTACAGAGCAGACCAAGCTACTCTGCCAAACTTCATCAACTGGTTGCTATCTTCCAAAACCACAAACTAG 1068 0.4616 MDSSLLLSEVDAVPHLPTNFIWPNEYLVDVQGELQAPVVDLDGFLRGDQEATQYAAKLIREACLNHGFFQVINHGVDSRLIREAHSQIDTFFKLPIHRKLSVQKTPASMWGYSGAHAHRFSSKLPWKETLSFPYHENTLEHVVTNYFKSTIGEDFEQAGVIFQKYCDGMKQLGLKLVELLAISLGVDRLHYRELFSDGCSIMRCNNYPSCQQPSLTLGTGPHCDPTSITILHQDLVGGLHVFADKKWKTVQPRLDALVVNIGDTFTALSNGRYKSCLHRAVVNKYKERKSLAFFLCPKEDKVLRAPDSVVGMDGTKQYPDFTWSDLLQFTQNHYRADQATLPNFINWLLSSKTTN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1358 355 PANTHER GIBBERELLIN 20-OXIDASE 10 351 - -
Pvu9g1358 355 PRINTS Isopenicillin N synthase signature 59 76 - -
Pvu9g1358 355 PRINTS Isopenicillin N synthase signature 222 243 - -
Pvu9g1358 355 PRINTS Isopenicillin N synthase signature 257 283 - -
Pvu9g1358 355 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 136 IPR026992 -
Pvu9g1358 355 Gene3D - 6 335 IPR027443 -
Pvu9g1358 355 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 297 IPR005123 -
Pvu9g1358 355 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 351 - -
Pvu9g1358 355 SUPERFAMILY Clavaminate synthase-like 13 336 - -
Pvu9g1358 355 Pfam 2OG-Fe(II) oxygenase superfamily 201 297 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1358 Pvu-Chr9 19423003 19426332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1358 10 335 Glycosyltransferase AT5G59530 27.059 1.45e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1358 K05282 - gmx:100776707 630.557