Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1353 ATGGCACATTTGGAGGAAATCCGAGAGAAACAAAGAGCTCGTGGCCCAGCCACCATTCTGGCCATTGGCACTGCAACTCCATCCAACTGCATTTACCAATCTGACTTCACCGATTACTACTTTCGAGTCACCAAGAGCGATCACATGACTCAACTCAAGGCCAAGTTAAAGCGCATATGTGAGAAGTCGATGATAGAGAAACGCTACATACATCTCACTGAAGAAATGCTGAAAGAAAACCCCAACATAGGTGCTTACGAGGAACCATCCTTGGATGTACGCCAAGACATATTAGTTGAGGAGGTTCCTAAGCTTGGTGAGAAGGCAGCATCCAAAGCCTTAAAGGAATGGGGCAGACCAAGATCAGATATTACTCATCTCATATTTTGCTCCACCTCGGGTGTAGACATGCCTGGTGCTGATTACCAACTTCTGAGGCTCTTGGGCCTTAAACCATCCACCAAAAGGTTCATGTTATACCATCAAGGTTGTTATGCTGGTGGCACCGTTCTTCGTCTCGCTAAAGACCTTGCTGAGAATAATGTTGGAGCACGTATTCTCGTGGTGTGTTCTGAGATCACAGTTGTCACCTTTCGTGGACCCTGTGAAACACACTTGGACTCGTTGGTGGGACAAGCCCTCTTTGGAGATGGAGCTTCATCCGTGATTGTTGGATCTGATCCTGACACATCCATCGAACGACCACTGTTTCACCTTGTGTCAGCATCTGAGACAATTCTACCCAACTCTGAGGGGGCAATTGAAGGACACTTGCGTGAGGTGGGGCTAACCTTTCATCTTAAGGATAACGTTCCTCAGTTGATTGGAGAGAACATAGAGAAAAGCCTCGAAGAAGCCTTCCACCCACTTGGGATCAGTGACTGGAACTCCTTGTTTTGGGTTGCCCACCCTGGTGGCCCTGCAATCTTGAAGCAGATAGAAGCAACGCTTGGGTTGAACCCTGATAAATTGAGAGCAACCAAACAAGTTCTGAAAGAGTATGGGAACATGTCTAGTGCATGTGTGCTGTTCATACTGGATGAGATGAGAAGTTGGTCCTTGGAGAAAGGGAAATCCAGTACTGGTGAAGGACTAAAGTGGGGTGTTTTATATGGGTTTGGCCCTGGCTTGACCATGGAGACCATTGTTTTACACAGCGCCGCCGTAGACCCAAACAACTAG 1182 0.4738 MAHLEEIREKQRARGPATILAIGTATPSNCIYQSDFTDYYFRVTKSDHMTQLKAKLKRICEKSMIEKRYIHLTEEMLKENPNIGAYEEPSLDVRQDILVEEVPKLGEKAASKALKEWGRPRSDITHLIFCSTSGVDMPGADYQLLRLLGLKPSTKRFMLYHQGCYAGGTVLRLAKDLAENNVGARILVVCSEITVVTFRGPCETHLDSLVGQALFGDGASSVIVGSDPDTSIERPLFHLVSASETILPNSEGAIEGHLREVGLTFHLKDNVPQLIGENIEKSLEEAFHPLGISDWNSLFWVAHPGGPAILKQIEATLGLNPDKLRATKQVLKEYGNMSSACVLFILDEMRSWSLEKGKSSTGEGLKWGVLYGFGPGLTMETIVLHSAAVDPNN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1353 393 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Pvu9g1353 393 Pfam Chalcone and stilbene synthases, C-terminal domain 239 386 IPR012328 -
Pvu9g1353 393 SUPERFAMILY Thiolase-like 235 385 IPR016039 GO:0016746
Pvu9g1353 393 Gene3D - 236 390 IPR016039 GO:0016746
Pvu9g1353 393 Gene3D - 1 235 IPR016039 GO:0016746
Pvu9g1353 393 SUPERFAMILY Thiolase-like 1 233 IPR016039 GO:0016746
Pvu9g1353 393 CDD CHS_like 16 384 - -
Pvu9g1353 393 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Pvu9g1353 393 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 3 389 IPR011141 GO:0009058|GO:0016747
Pvu9g1353 393 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Pvu9g1353 393 PANTHER CHALCONE SYNTHASE 8 3 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1353 Pvu-Chr9 19253077 19254555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1353 K00660 - nnu:104591893 625.165