Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1338 ATGGCAGTTCCAGTGATTGATTTTTCAAAGCTGAATGGAGAGGAAAGAGCCAAAACTATGGCTCAGATTGCTAATGGGTGTGAAGAGTGGGGATTTTTTCAGTTGATCAACCATGGCATTTCAGAGGAGCTACTTGAGAGGGTGAGGAAGGTTTCCTCCGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAGAAGTCCACACCAGTGAAGCTAATTGGTGATATAGTTGAAAAGAAGGAAAGTGAAAAGCTGGAGCATGAGGATTGGGAGGATGTTATCACTCTCCTTGATGATAACGAGTGGCCAGAAAGAACACCAGGCTTCAGGGAAACCATGGCGGAATATCGGTCTGAGTTAAAGAAATTGGCAGAGAGGGTGATGGAGGTGATGGATGAGAATCTGGGCTTACCCAAAGGATACATCAAGAAGGCACTGAATGGTGGAGATGGAGACGGTGCATTCTTTGGCACCAAGGTGAGCCACTATCCTCCCTGTCCCAATCCAGAGCTTGTGAAAGGTCTGCGAGCTCACACTGATGCAGGAGGTGTCATCCTACTCTTCCAAGATGACAAGGTTGGTGGCCTCCAGATGCTCAAAGATGGGCAATGGATTGATGTGCAACCTCTGCCAAATGCCATTGTGATCAACACTGGTGATCAGATTGAGGTCCTGAGCAACGGTAGATACAAGAGTTGTTGGCACAGGGTTCTGGCCACTCCAGATGGGAACAGAAGATCAATTGCCTCCTTCTATAACCCATCACTCAAGGCCACCATATGTCCTGCACCCCAACTCGTGGAAAAAGAAGACCAACAAGTGGATTACACTTATCCTAAGTTTGTTTTTGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTTCCGAAGGAACCAAGGTTCCAAGCTGTTAGGGCCATGTGA 927 0.4693 MAVPVIDFSKLNGEERAKTMAQIANGCEEWGFFQLINHGISEELLERVRKVSSEFYKLEREENFKKSTPVKLIGDIVEKKESEKLEHEDWEDVITLLDDNEWPERTPGFRETMAEYRSELKKLAERVMEVMDENLGLPKGYIKKALNGGDGDGAFFGTKVSHYPPCPNPELVKGLRAHTDAGGVILLFQDDKVGGLQMLKDGQWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLATPDGNRRSIASFYNPSLKATICPAPQLVEKEDQQVDYTYPKFVFGDYMSVYAEQKFLPKEPRFQAVRAM* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1338 308 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Pvu9g1338 308 Gene3D - 2 308 IPR027443 -
Pvu9g1338 308 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 306 - -
Pvu9g1338 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 150 254 IPR005123 -
Pvu9g1338 308 SUPERFAMILY Clavaminate synthase-like 2 301 - -
Pvu9g1338 308 Coils Coil 113 133 - -
Pvu9g1338 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 99 IPR026992 -
Pvu9g1338 308 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1338 Pvu-Chr9 19091106 19093168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1338 1 271 Glycosyltransferase AT5G59530 31.802 1.40e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1338 K05933 - gmx:100796909 588.186