Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g1332 | ATGGTCAATGCCACTAAAGGAGTCTTCATTTCCTGTGACGTTCCCATGGCACAATATATCATCAATATGAATGCTTCATTGCCTGCATCTGATAAGTTCATTATACATGTCTTGGATAGCACCCACATGTTTGTCCAACCTCATGTTGAGTTAATGATACGAAGTCAAATCGCCAAGTTTAGAGAGGACAACACATATGTCAAGCCTACTTGA | 213 | 0.3991 | MVNATKGVFISCDVPMAQYIINMNASLPASDKFIIHVLDSTHMFVQPHVELMIRSQIAKFREDNTYVKPT* | 71 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g1332 | 70 | PANTHER | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 | 1 | 70 | IPR009400 | GO:0000439|GO:0006289|GO:0006367 | |
| Pvu9g1332 | 70 | Pfam | Transcription factor TFIIH complex subunit Tfb5 | 1 | 68 | IPR009400 | GO:0000439|GO:0006289|GO:0006367 | |
| Pvu9g1332 | 70 | Gene3D | - | 1 | 68 | IPR035935 | - | |
| Pvu9g1332 | 70 | SMART | Tbf5_2 | 1 | 68 | IPR009400 | GO:0000439|GO:0006289|GO:0006367 | |
| Pvu9g1332 | 70 | SUPERFAMILY | TFB5-like | 6 | 68 | IPR035935 | - | |
| Pvu9g1332 | 70 | PANTHER | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 | 1 | 70 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g1332 | Pvu-Chr9 | 19024243 | 19025391 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g1332 | K10845 | - | gmx:100795164 | 137.502 |