Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1317 ATGAAGCCGTTGCATTTGCGACCCATCAAGGTCTCTCTCCCGGCCATGACCACCAAGAAGAGAAAAAGATCCCCAAAACAGGTCCCAGTCCCTCCCTCAACGCCCCCAACTCCCCAAACCCAGGCCCGCCACTCCCTCAACACCGCTAAAGCCCGGGCCTGGGCCCCTCTCAACTTGACCCAGGCCGAACTCTCTCTGCCACTCACCTTCCCCACGGGCCAAACCTTCCGCTGGAAAAACACCGCCCCTCTACAATACACCGGCCTCGTTGGGCCCCACCTCATAACCCTCAAACACCTCCAAAATGGCGACGTTTCCTACTGCCTCCACTCCCACTCTAACCCCGAAAAAGCCAAAACCGCCTTGCTAGATTTCCTTAACGCCGCCGTTTCTCTCGCCGACTTATGGAAGGCGTTTTCCGCTTCCGATGCGAGGTTCGCGGCGCTAGCGCTCCATTTGAGCGGTGCGAGGGTGCTCCGGCAAGACCCTTTCGAGTGTTTGATTCAGTTTCTATGCTCTTCCAATAACAACATTGCACGAATCACGAAGATGGTTGACCACGTTTCGTCTCTGGGAATACACGCGGGAGACGTTGGAGGATTTCAGTTCCACGTTTTCCCTTCCCTGGAACAACTTTCCTCCGTCTCAGAGCAACAACTCAGAGACGCGGGTTTCGGTTACAGGGCTAAATATATAATTGGTACGGTTAATGCTTTGCGATCAAAACCTGGTGGAGGGGAAGAGTGGCTTCGTTCTCTTCGTAAGTTGGATCTTCCAGATGTTATATCCGCACTTTCTACGTTACCTGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCGCTTGATCAGCACCATGCCGTTCCTGTTGACACTCACGTCTGGCGGATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCAAAGCTCTGTATTCGTGTTGCAGAGGCATTTGTTACCAAGTATGGTAAATATGCTGGGTGGGCGCAGACTCTATTGTTCATAGCTGAATTACCTTCACAGAAGGCCATCATACCTTCACATTTGTGGACTATCAGACAACGAAATCCTGCAAAGATAGAAGATGGCCAAGAAATTGAGTGA 1125 0.52 MKPLHLRPIKVSLPAMTTKKRKRSPKQVPVPPSTPPTPQTQARHSLNTAKARAWAPLNLTQAELSLPLTFPTGQTFRWKNTAPLQYTGLVGPHLITLKHLQNGDVSYCLHSHSNPEKAKTALLDFLNAAVSLADLWKAFSASDARFAALALHLSGARVLRQDPFECLIQFLCSSNNNIARITKMVDHVSSLGIHAGDVGGFQFHVFPSLEQLSSVSEQQLRDAGFGYRAKYIIGTVNALRSKPGGGEEWLRSLRKLDLPDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCIRVAEAFVTKYGKYAGWAQTLLFIAELPSQKAIIPSHLWTIRQRNPAKIEDGQEIE* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1317 374 SUPERFAMILY TATA-box binding protein-like 50 161 - -
Pvu9g1317 374 Gene3D Hypothetical protein; domain 2 162 286 - -
Pvu9g1317 374 CDD ENDO3c 164 342 IPR003265 GO:0006284
Pvu9g1317 374 Gene3D - 135 345 IPR023170 -
Pvu9g1317 374 PANTHER N-GLYCOSYLASE/DNA LYASE 53 355 - -
Pvu9g1317 374 MobiDBLite consensus disorder prediction 15 46 - -
Pvu9g1317 374 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 57 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
Pvu9g1317 374 SUPERFAMILY DNA-glycosylase 162 343 IPR011257 GO:0003824|GO:0006281
Pvu9g1317 374 Pfam HhH-GPD superfamily base excision DNA repair protein 168 303 IPR003265 GO:0006284
Pvu9g1317 374 SMART endo3end 172 345 IPR003265 GO:0006284
Pvu9g1317 374 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 53 355 - -
Pvu9g1317 374 Gene3D - 40 126 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1317 K03660 - gmx:100789749 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1317 9 18889786 18892269 Pvu9g1317 9 18889786 18892269 ECH