Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1316 ATGGCTATCACACACAAACAACATACACTGAGAGTGAAAGAAAGAAGCATAAACGCACACTCTTCATTGCCAAAAGCTAACAAAGTTACAGCAACAGCTGAAGCTGAAATGGTGAAGGTGTGGTGGTGGTGGAGATGGTCTTCTCCCTTCGCTCTCATCTTAGCGGCGTTTATTGGTGGCGTATGTGGTGGCAATGTCACCTACGACGGAAGATCCTTAATCGTTGATGGACAACATAGAATCCTCTTCTCCGGTTCAATTCATTATCCTCGTAGCACTCCTCAGATGTGGCCTAATTTAATTGCGAAAGCTAAGGAAGGTGGATTAGATGTCATACAAACTTACGTGTTTTGGAACCTTCACGAACCTCAACAAGGCCAGTATAACTTTAGAGGGAGGCATAATATAGTGAGATTCATTAAGGAAATTCAAGCGCAAGGCTTATATGTAACCCTCCGAATTGGACCATACATTGAGAGTGAATGCACATATGGGGGTCTACCAATATGGTTACATGATATTCCGGGTATCGTATTCAGATCTGACAATGAGCAATTCAAGTTTCACATGCAAAGGTTCGCTGCCAAAATAGTCAACGTTATGAAATCAGCCAATCTTTATGCTTCACAAGGAGGACCTATAATACTATCACAGATTGAGAACGAATATGGGAACGTTGAAGGGGCGTTTCACGAGAAAGGACTATCTTATATTCGTTGGGCTGCCCAAATGGCTGTGGGGCTCCAAACTGGTGTGCCTTGGGTGATGTGCAAGCAAGATAATGCTCCTGATCCCGTGATCAACACATGCAATGGCATGCAGTGTGGGACAACTTTTAAGGGGCCTAACTCACCTAACAAGCCTTCACTCTGGACAGAGAACTGGACAAGCTTTTACCAAGTCTTTGGTGGAGTACCGTATGTAAGATCGGCTGAAGACATTGCATATAATGTTGCTCTGTTCATTGCAAAGAGAGGAAGCTATGTCAATTACTACATGTACCATGGAGGAACCAATTTCGACAAGATAGCCTCTGCTTTCGTAATGACAGCCTATTATGACGAAGCTCCACTGGATGAATATGGTTTGGTTAGGCAACCAAAATGGGGCCATCTTAAGGAGCTGCATGCAGCAATCAAGTCAAGTTCAAAATCTCTACTTTATGGTACTCAAACTAGCTTCAGCTTGGGCTCACGACAGAACGCTTATGTTTTCAAAAGTAGCTCAACGGAATGTGCTGCCTTCCTGGAAAACAATGCAGATCGAAGTGTCACAATTCAATTTCAAAACACTCCATACCAATTACCCCCCAAATCAATCAGTATTCTACCAGACTGCAAGAATGTAGCCTTTAACACTGCCAAGGTACGCACACAAAATGACAGATCAATGAAACCCCATTTACAGTTCAATTCAGCTGAAAAATGGAAAGTGTACAAAGAAGCCATCCCAAGCTTTGACGATACTTCATTAAGAGCAAATGCACTATTGGATCAAATCAGCACAGCAAAAGATACATCTGACTATATGTGGTACACATTCAGGTTTAATGACAATTCTCCTAATGCTCAATCCATTCTAACAGCACACAGCCAAGGACATGTTTTGCATACCTTCATCAATGGAAATTTAGTAGGTTCTGCTCACGGAAGTCACAAAAATGCATCTTTTGTCATGGAAAATAAACTCAATCTTATACAAGGGGTGAACAATATTTCTTTCCTCAGTGCAACAGTTGGATTGCCGAACTCAGGAGCATATCTAGAGCACAAAGTTGCCGGTTTAAGTGGAGTGAAAGTTCAAGGCCGAGATTTCACTAATCAAGCATGGGGATATCAGGTTGGGCTGTTGGGAGAAAAATTGCAAATCTACACAGGTAGTGGATCAAGTAAAGTTCACTGGGAAAGCTTTCAAAGCTCAACGAAGCCACTCACATGGTATAAGACCACATTTGATGCACCAGAGGGCAACGATCCACTAGCGCTTAACCTTGGTTCCATGGGAAAGGGTTATGCTTGGGTTAATGGCCAAGGTATAGGTCGATATTGGGTATCTTTCCACACACCAAAGGGAACAGCTTCGCAAAAATGGTATCACATACCCCGATCCCTCCTTAAATCTACTGGGAACCTACTAGTTCTACTAGAAGAAGAAACTGGGAACCCACTTGCAATCACTCTAGACTTAGTTTACATCACATCACAGTAG 2208 0.4262 MAITHKQHTLRVKERSINAHSSLPKANKVTATAEAEMVKVWWWWRWSSPFALILAAFIGGVCGGNVTYDGRSLIVDGQHRILFSGSIHYPRSTPQMWPNLIAKAKEGGLDVIQTYVFWNLHEPQQGQYNFRGRHNIVRFIKEIQAQGLYVTLRIGPYIESECTYGGLPIWLHDIPGIVFRSDNEQFKFHMQRFAAKIVNVMKSANLYASQGGPIILSQIENEYGNVEGAFHEKGLSYIRWAAQMAVGLQTGVPWVMCKQDNAPDPVINTCNGMQCGTTFKGPNSPNKPSLWTENWTSFYQVFGGVPYVRSAEDIAYNVALFIAKRGSYVNYYMYHGGTNFDKIASAFVMTAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSSSKSLLYGTQTSFSLGSRQNAYVFKSSSTECAAFLENNADRSVTIQFQNTPYQLPPKSISILPDCKNVAFNTAKVRTQNDRSMKPHLQFNSAEKWKVYKEAIPSFDDTSLRANALLDQISTAKDTSDYMWYTFRFNDNSPNAQSILTAHSQGHVLHTFINGNLVGSAHGSHKNASFVMENKLNLIQGVNNISFLSATVGLPNSGAYLEHKVAGLSGVKVQGRDFTNQAWGYQVGLLGEKLQIYTGSGSSKVHWESFQSSTKPLTWYKTTFDAPEGNDPLALNLGSMGKGYAWVNGQGIGRYWVSFHTPKGTASQKWYHIPRSLLKSTGNLLVLLEEETGNPLAITLDLVYITSQ* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1316 735 SUPERFAMILY (Trans)glycosidases 65 380 IPR017853 -
Pvu9g1316 735 Gene3D - 614 732 - -
Pvu9g1316 735 Pfam Glycosyl hydrolases family 35 72 378 IPR031330 -
Pvu9g1316 735 PANTHER BETA-GALACTOSIDASE RELATED 50 733 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 SUPERFAMILY Galactose-binding domain-like 440 590 IPR008979 -
Pvu9g1316 735 Pfam Beta-sandwich domain in beta galactosidase 386 456 IPR041392 -
Pvu9g1316 735 SUPERFAMILY Galactose-binding domain-like 609 731 IPR008979 -
Pvu9g1316 735 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 211 223 IPR019801 GO:0004553|GO:0005975
Pvu9g1316 735 Gene3D Glycosidases 62 383 - -
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 76 93 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 97 115 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 152 171 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 209 224 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 327 342 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 346 362 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 642 656 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PRINTS Glycosyl hydrolase family 35 signature 669 685 IPR001944 GO:0004553|GO:0005975
Pvu9g1316 735 PANTHER BETA-GALACTOSIDASE 50 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1316 Pvu-Chr9 18880608 18889481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1316 52 733 Glycoside Hydrolase AT5G63800 59.568 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1316 - - pvu:PHAVU_009G127500g 1520.37