Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1306 ATGGCGGGTAAAATTACGATTTGTTCGTTCGTGTTCGTGTCCTCTCTCCTTCTCACACTTCCTTCTCAAATCTCTGCTCAAGAATCGGAGGCTAAGGAGTTCGTTCTGACATTGGACCACTCCAACTTTTCCGACACCGTCAAGAAGCATAATCTCATCGTCGTTCAGTTCTACGCACCATGGTGTGAGCGCAGTAAGAAGCTTGCTCCGGAGTATGAAAAAGCCGCTTCTATCCTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCGGATGGTGAGAAGAACAAAGACCTTGCAACCGAATTTGAAGCTAGGACTTACCCAACAATTCGGATACTGAGAAATGGGGGAAAGAATGTTCAAGAATACAAAGGTCCCCGTGAAGCAGATGGCATTGCTGAGTATTTGAAGAAACAAAGTGGTCCTGCTTCTGCTGAAATTAAATCTGTTGATGATGCTACTGCATTTATTGGTGAAAACAAAGTTGTTATTGTTGGAGTGTTTCCGAAATTTTCTGGGGAGGAGTTTGATAACTTCACTGTGTTAGCAGAAAAGTTGCGTGGTGACTATGACTTTGGTCACACTATGAATGCCAAACACCTTCCAAGAGGAGAATCATCAGTTGCTGGGCCCGTAATAAGGTTATTCAAACCATTTGACGAACTTTTTGTTGACTTTCAGGATTTTCATGTGGAAGCTCTAGAGAAATTCGTTGAAGAATCAAGTGTGCCTGTTGTGACTGTCTTTGATAGTGATCTGAGAAATCATCCTTTTATTGCTAAATTCTTCAGCAGTCCCAATACGAAGGTAATGTTGTTAATCAACTTCACTGCTGAAGGTGCTGAAACTTTCAAATCAAAATACCGAGAAATTGCTGAGCAATATAGACAATCAGGTGTAAGCTTTCTGGTGGGAGATGTCAAGTCTACTAAAGGTTCTTTCCAGTATTTTGGGGTGAGGGAAGACCAAGTACCTCTAATTTTAGTACAACGTAATGATGGGAAGAAATTTCTTAAACCCAATTTGGAACCTGAGCACATTTCAACTTGGTTCAAGGCATACAAGGATGGAAATATTGCACCATATTTTAAGTCTGAACCTATTCCTGAAGCTAACAACGAACCTGTTAAAGTGGTTGTTGGGGACAGTTTCTCGGACATAGTTTTGAACTCTGGGAAGAATGTTCTGCTGGAGTTTTATTCTCCCTGGTGTATTTATTGCACACAGTTGGCTCCAATATTGGAGGAAGTTGCCGTCTCATATCAAAGTGATGCTGGTGTTATTATTGCAAAACTGGATGGAATTGCCAACGATATCTCAAGTGATTCCTTTGAAGCCAAACGTTATCCAACTGTGTACTTCAGGTCATCAAGTGGAAAGATATCAAAATACGGTGGCAATAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAATCGGGATAAACCTGCTCATCAAGAACAAGCAAAGGGTGAGAAAGAAAAATTAAAAGATGAGCTTTGA 1515 0.4086 MAGKITICSFVFVSSLLLTLPSQISAQESEAKEFVLTLDHSNFSDTVKKHNLIVVQFYAPWCERSKKLAPEYEKAASILSSHDPPVVLAKIDADGEKNKDLATEFEARTYPTIRILRNGGKNVQEYKGPREADGIAEYLKKQSGPASAEIKSVDDATAFIGENKVVIVGVFPKFSGEEFDNFTVLAEKLRGDYDFGHTMNAKHLPRGESSVAGPVIRLFKPFDELFVDFQDFHVEALEKFVEESSVPVVTVFDSDLRNHPFIAKFFSSPNTKVMLLINFTAEGAETFKSKYREIAEQYRQSGVSFLVGDVKSTKGSFQYFGVREDQVPLILVQRNDGKKFLKPNLEPEHISTWFKAYKDGNIAPYFKSEPIPEANNEPVKVVVGDSFSDIVLNSGKNVLLEFYSPWCIYCTQLAPILEEVAVSYQSDAGVIIAKLDGIANDISSDSFEAKRYPTVYFRSSSGKISKYGGNRTKEDIIEFIEKNRDKPAHQEQAKGEKEKLKDEL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1306 504 CDD PDI_b'_family 264 358 - -
Pvu9g1306 504 Gene3D Glutaredoxin 373 484 - -
Pvu9g1306 504 Pfam Thioredoxin-like domain 171 355 - -
Pvu9g1306 504 Coils Coil 490 504 - -
Pvu9g1306 504 MobiDBLite consensus disorder prediction 481 504 - -
Pvu9g1306 504 PANTHER PROTEIN DISULFIDE-ISOMERASE 9 496 - -
Pvu9g1306 504 CDD PDI_b_family 147 243 - -
Pvu9g1306 504 ProSiteProfiles Thioredoxin domain profile. 14 144 IPR013766 -
Pvu9g1306 504 TIGRFAM ER_PDI_fam: protein disulfide isomerase 35 504 IPR005792 GO:0003756
Pvu9g1306 504 CDD PDI_a_PDI_a'_C 378 480 - -
Pvu9g1306 504 PANTHER PROTEIN DISULFIDE ISOMERASE 9 496 - -
Pvu9g1306 504 Gene3D Glutaredoxin 248 372 - -
Pvu9g1306 504 Gene3D Glutaredoxin 142 247 - -
Pvu9g1306 504 ProSiteProfiles Thioredoxin domain profile. 357 485 IPR013766 -
Pvu9g1306 504 SUPERFAMILY Thioredoxin-like 148 247 IPR036249 -
Pvu9g1306 504 CDD PDI_a_family 36 139 - -
Pvu9g1306 504 Pfam Thioredoxin 35 141 IPR013766 -
Pvu9g1306 504 Pfam Thioredoxin 379 482 IPR013766 -
Pvu9g1306 504 Gene3D Glutaredoxin 22 141 - -
Pvu9g1306 504 SUPERFAMILY Thioredoxin-like 345 485 IPR036249 -
Pvu9g1306 504 SUPERFAMILY Thioredoxin-like 33 145 IPR036249 -
Pvu9g1306 504 SUPERFAMILY Thioredoxin-like 263 376 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1306 Pvu-Chr9 18760310 18767201 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1306 K09580 - gmx:100170705 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1306 9 18760310 18767201 Pvu9g1306 9 18760310 18767201 ECH