Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1301 ATGGTGGGTGTTACCTGCGTCTTTCGCACCAACTCTATTCGTGACCTTTGCAAATTATACAAATCAATTATCAAAAGATGGTTTCGTGGTAGCAAGAAACCACGAGGCCACAACCCAAAAAAACAGAATCCTGTTGAAGATGGCAAAGTCACGAATGGAATTGGGTGCTTCAGATTCAAGGGCGATGATTTGAGGAGCAATGAGGGTGATCATCCAATGAGTAGTCCAAGAGGATGTTTTTTGTGTAGGCATAGAAGCTCAGATAGTTCCTGCTTTCCTTGCATGAATTCTGCGTCTCGAAATGCAAGCAGAAAGACTAACCAGACATCGACCAAGAACTGTGATTTTATGTCTTCACCTTCTCCTTCTGTTTCATTGAACAGAAGCGGCAGTTTAAGAATGCCTCCTTATCTGAACTCAAGGAATGCCAGCACCAGGAGCAACAATCCAATCATGTATTCCAATTCATCTGGGATGCAAAAACCCCCACCAATTGAGAAAAAACTGGAATGCACTCTGGAAGACTTGTGCTATGGTTGCAAGAAAAACATCATGATCACCAGGGATGTCCTCACAGATACAGGGGGAATATTTCAAGAGGAAGAATTGCTAACGATAAATGTGCAACCTGGTTGGAAGAAAGGAACAGAGATTAAATTTGAAGGAAAAGGGAATGAGAGACCAGGGGCATACAGAGAAGATATAATATTTATCATCTCCGAGAAGAGACACGAGTTATTTAGAAGAGACGGTGATGATTTGGAATTGAGTGTAAAAATTCCCTTAGTACAAGCACTTTCTGGGTGTACAATATTAATTCCACTGTTGGGTGGAGGGCACATGAATCTGAAACTTGACAACATCATACACCCTGGCCATGAAAAGATCGTCCCTGATCAAGGCATGCCAATCTCCAGAGAACAAGGAAAGAGAGGAAACTTGAGTATTACATTTCAAGTTCAGTTTCCAACACATCTCACAAGTAGTCAAAGATCAGAGGTTGTTCGTATTTTACAGGATTCTTGA 1026 0.4152 MVGVTCVFRTNSIRDLCKLYKSIIKRWFRGSKKPRGHNPKKQNPVEDGKVTNGIGCFRFKGDDLRSNEGDHPMSSPRGCFLCRHRSSDSSCFPCMNSASRNASRKTNQTSTKNCDFMSSPSPSVSLNRSGSLRMPPYLNSRNASTRSNNPIMYSNSSGMQKPPPIEKKLECTLEDLCYGCKKNIMITRDVLTDTGGIFQEEELLTINVQPGWKKGTEIKFEGKGNERPGAYREDIIFIISEKRHELFRRDGDDLELSVKIPLVQALSGCTILIPLLGGGHMNLKLDNIIHPGHEKIVPDQGMPISREQGKRGNLSITFQVQFPTHLTSSQRSEVVRILQDS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1301 341 Gene3D - 160 243 - -
Pvu9g1301 341 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 1 339 - -
Pvu9g1301 341 Gene3D - 244 324 - -
Pvu9g1301 341 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Pvu9g1301 341 CDD DnaJ_C 163 326 - -
Pvu9g1301 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Pvu9g1301 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 332 IPR008971 GO:0006457|GO:0051082
Pvu9g1301 341 MobiDBLite consensus disorder prediction 98 148 - -
Pvu9g1301 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 245 IPR008971 GO:0006457|GO:0051082
Pvu9g1301 341 Coils Coil 335 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1301 Pvu-Chr9 18690563 18692366 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1301 K09519 - gmx:100782604 466.463