Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1262 ATGTCTCTCACCGTCAACTCTCTTTCCACTCAGAATCGCACCGCCAAGCACCCTCTCCAGGTTGCGAAGCGCTTAGAGAAGTTCCAGAGATCTAAGGAAGCATTGATCAGCCAGAAAGATGGAATCATAAACCTTGGACGAGGCTTTCCCAACTTTGATGGTCCAGAGTTTATAAAGGAAGCAGCAATTCAAGCAATAAGGGATGGGAAAAATCAGTATGCACAAGGCTTTGGAGTTCCGGAGTTAAACATTGCTATTGCTGATAGATTTAGGAAAGAAACTGGATTAGTGGTAGACCCTGATAATAAAGTTACTGTCACAAATGGGTGCTTAGAAGCAATTTCTGCAACTGTTTTAGGATTAATAAATCCTGGTGATGAGGTTATCCTGTTTTCTCCTTTATATGATTGTTATGAAGGCAATTTAGCCATGGCTGGTGCAAAAATAATAAGCATCCCTTTGCAACCTCCAGACTTTGCTATCCCGATTGAAAAGTTGAAGTTAACCGTGTCAAGGAGTACACGTGCCATTGTTATAAATACTCCTCACAACCCTACGGGAAAGATGTTCTCTCTAGAGGAACTCAATGACATTGCATCCCTTTGCATTGAGAATGATGTTCTAGTTTTTGCTGATGAAGTTTATCATAAGTTGACATTTGATATGGAGCACATTTCAATAGCTTCTTTGCCTGGAATGTTTGAAAGGACCGTGACAATGAACTCATTGGCAAAGACATTTAGCTTAACAGGATGGAAGATTGGTTGGGCCGTAGCACCCTCACACCTGACATGGGGACTGCGACTGGCACATTCTTTCATCACTTTCTCAAACGCCACTCCTTTGCAGTGTGCAGCTGCAGTAGCTCTTAGAGCGCCAGACTCTTACTATGTGGAGCTGAAGAGGGATTATATGGCAAAGAGGGCTATTTTGGTGGAAGGATTAAAGGCCGTTGGCTTTAAGGTATTCCCACCCAACGGAACATTCTTTGTTTTAGCTGATCATACCCCTTTTGGATTGGAAAATGATGTTGCATTTTGTGAATATCTGCTTAAGGAGGTGGGGGTGCTGGCAATCCCTTGCAGTGTGTTTAGCTTCAATCCAGAAGAGGGAAAGAATCTAGTCAGATTTGTTTTCTGCAAGGATGATGAAACTCTTAGGGTCGCGGTTGAGAGGATGAAGGAGAAACTTAGAAAATGA 1200 0.4258 MSLTVNSLSTQNRTAKHPLQVAKRLEKFQRSKEALISQKDGIINLGRGFPNFDGPEFIKEAAIQAIRDGKNQYAQGFGVPELNIAIADRFRKETGLVVDPDNKVTVTNGCLEAISATVLGLINPGDEVILFSPLYDCYEGNLAMAGAKIISIPLQPPDFAIPIEKLKLTVSRSTRAIVINTPHNPTGKMFSLEELNDIASLCIENDVLVFADEVYHKLTFDMEHISIASLPGMFERTVTMNSLAKTFSLTGWKIGWAVAPSHLTWGLRLAHSFITFSNATPLQCAAAVALRAPDSYYVELKRDYMAKRAILVEGLKAVGFKVFPPNGTFFVLADHTPFGLENDVAFCEYLLKEVGVLAIPCSVFSFNPEEGKNLVRFVFCKDDETLRVAVERMKEKLRK* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1262 399 SUPERFAMILY PLP-dependent transferases 32 398 IPR015424 -
Pvu9g1262 399 Gene3D - 55 293 IPR015421 GO:0003824
Pvu9g1262 399 PANTHER FI04487P 24 399 - -
Pvu9g1262 399 Pfam Aminotransferase class I and II 42 392 IPR004839 GO:0009058|GO:0030170
Pvu9g1262 399 CDD AAT_like 43 395 - -
Pvu9g1262 399 Coils Coil 383 399 - -
Pvu9g1262 399 Gene3D Aspartate Aminotransferase, domain 1 37 393 IPR015422 GO:0003824
Pvu9g1262 399 PANTHER FI04487P 24 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1262 Pvu-Chr9 18241227 18244539 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1262 K23977 - gmx:100818968 633.254