Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1247 ATGCTGTTGCGTAACCCTTCGTGGACAACAACGTTGCTATCAGCCACCGCGAGAAGGCTCTACAACCACCGCCTTTCTACATCTTCGTCGATGGCGTCTTCAGCTTTGGAATGCAGTTTGCTGGTTTTGTATGGAAAATCATTGGCAGAGAATGAAACTGCCAAAGCTATAAAAACCAATAACACTCTCAAGCTCCCCGAGAATGGAGAATACTCCCTCGTTTTGCATTCGCAGCTGGATAAAGCTCTTATGCAAGGGTCTTTTCAAATTCCCTCCTTTATGGATTCTCTTTCAACCAAACAATTTGGCAGGCTTCTCATCTGGTCCCCTCAGTTAACTTCAACACATGATATCGTTTCACAAAACTTTTGTGAGCTTCCCATTGGTACAGTTTGTGTCGCTGATGTTCAGACCAAGGGACGAGGTCGGTCTAAGAATGTCTGGGAATCTCCATCGGGTTGCCTTATGTTTTCTTTTACTTTGCAAATGGAGGATGGACGAGTCGTTCCTTTAGTTCAGTATGTGGTTTCCCTGGCTATCACAGAGGCAGTCAAGGATATCTGTTACAAAAACGGGTTACCAAGCATAGATGCTAAAATCAAGTGGCCAAATGATCTTTACTTAAATGGCTCTAAAGTTGGAGGCATTCTTTGCACCTCGACATATAAATCAAAGAAGTTCAACGTTAGTGCAGGAATAGGCTTGAATGTCAACAATGAGAAGCCAACAACATCCTTAAATACAGTTCTAAGAGAGTTGTCTACAGGAGGTTACCAATTTCAAAGAGAAGATATTCTAGCCGCCTTTTTTAACAAATTTGAGGAATTTTATGGTTTATTTGTGAATCAAGGATTTCAGACCCTAGAGGAGCTCTATATTAAGACATGGTTGCACAGTGGACAGAGAGTTGTTGTACAAGAAAAGAATGGGGACAAAGTGATCGAGCATGTGGTAACTATTCAGGGTTTGACATCTTCGGGATATTTATTGGCTGTCGGTGATGACAATCAAATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTAGTCAGAAGGAAACTCGACTGA 1083 0.4201 MLLRNPSWTTTLLSATARRLYNHRLSTSSSMASSALECSLLVLYGKSLAENETAKAIKTNNTLKLPENGEYSLVLHSQLDKALMQGSFQIPSFMDSLSTKQFGRLLIWSPQLTSTHDIVSQNFCELPIGTVCVADVQTKGRGRSKNVWESPSGCLMFSFTLQMEDGRVVPLVQYVVSLAITEAVKDICYKNGLPSIDAKIKWPNDLYLNGSKVGGILCTSTYKSKKFNVSAGIGLNVNNEKPTTSLNTVLRELSTGGYQFQREDILAAFFNKFEEFYGLFVNQGFQTLEELYIKTWLHSGQRVVVQEKNGDKVIEHVVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRRKLD* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1247 360 Gene3D Bira Bifunctional Protein; Domain 2 94 295 IPR045864 -
Pvu9g1247 360 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 43 358 - -
Pvu9g1247 360 SUPERFAMILY Class II aaRS and biotin synthetases 94 296 IPR045864 -
Pvu9g1247 360 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 91 281 IPR004143 GO:0036211
Pvu9g1247 360 Pfam Biotin/lipoate A/B protein ligase family 110 236 IPR004143 GO:0036211
Pvu9g1247 360 Pfam Biotin protein ligase C terminal domain 298 353 IPR003142 GO:0036211
Pvu9g1247 360 PANTHER BIOTIN PROTEIN LIGASE 43 358 - -
Pvu9g1247 360 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 109 333 IPR004408 GO:0004077|GO:0036211
Pvu9g1247 360 CDD BPL 106 280 IPR004408 GO:0004077|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1247 K01942 - gmx:100818402 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1247 9 18088928 18094316 Pvu9g1247 9 18088928 18094316 ECH