Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1246 ATGCATCCTTTCTGCTGCGTGTCCGCCATTTCCGACCAGGCCTCGCCAGTGAAACCCTCGTTCGCGGACTTCCCCATGCCGCCACTCCCCGCCGCCGCCGCCGCCACCGTGAGATCCGATTCGGCGCCGCGGCACAGTCACAAGCACAGCCTCAGCGGGAGTCAGCGGGAGCAGCCGGTGGACGTGAAGATCAACGACCTCGTCGGCAACGGAATCTCCGGAATACTGTACAAATGGGTGAATTACGGCAAAGGATGGCGACCGCGATGGTTTGTACTCCAAGACGGTGTTCTATCCTACTATAAGATTCACGGACCTGATAAGATCGTCGTGAATCCCGAAACCGAGAAAGGCACCATGGTTATTGGCGAAGAATCCATGCGCAGGATCACTCGCAACCGCAATTCCTATCCCTGCCAGCACGTGCGAAAGCCGTTTGGGGAAATCCATCTCAAGGTTTCGACCATTCGCGAGAGCAAATCGGATGACAAGCGGTTCTCGGTCTTCACCGGAACGAAGAGGCTCCACCTGAGGGCGGATACGCGTGAGGATCGCGTGTCCTGGACGGAGGCGTTGCAGGCGGTGAAGGACATGTTCCCGCGGATGTCGAACAGCGAGTTGATGGCTCCGTTGGACAATGTAACCGTTTCGACCGAGAAACTGAGACTTCGGCTTATGGAAGAGGGAGTGAGCGAGGGGGCTATTCAGGACAGTGAGCAAATAATGAAGAGTGAGTTTGCGGCTCTGCAAAGCCAGCTTGTGCTGCTTAAGCAGAAGCACTCCATTCTCATTGACACTTTGCGTCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTAGTTGATGAGAGCCAAAGACAGTGGAATGATGAAGAGTCTTCCTCAAGATTAGCGCAAGAAAAATTTAGTGAAGGAACTGCAAGTGAATCTGAAGATGACAATGATCGAAATGATGCTGCAGAGGAAGAAACTGACGATGATGACAATGCCTTTTTTGATACTCGTGATATTCTATCGTCCAGTTCTTTTAAAAGTAATGGGTCTGATTACCGAATGTCATCCTTCTCTTCAGATGATGAAGGGTTCTATGCATTGGAATCAGAGGATGACATAGATCCTTCGATTAGATATGTTGGAACCAATTACCCTCATGTTAAACGGCGTAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGAGTCAGTCTGTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTTTCCTCCCTACAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTTTGGACCAAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGGTTCTCTATGTTGCGGCTTTTGCTATATCTGGCTATGCTGCAACAGAAGGAAGAGTTTGCAAACCATTTAATCCGTTACTTGGGGAAACATACGAGGCTCACTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATTGTAGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAGTTTTGGGGGCGATCAATTCAGCTTGACCCTGTTGGTATGTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTATACTGTGATCATTATGGTACAATGCGTATACAGGGAAACCAAGAGTACTCGTGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATCATTCAAGATAGGAATGGAAAAACTGTATCTACTTTGTTTGGGAAATGGGATGAAAGCATGCATTACGTTAACGGAGACTACACCGGGAAAGGGAAAGGGCATGAATCTTTGTCAGATGCCCATTTGCTCTGGAAGCGAAGCAAGGCTCCCAAGATTCCCACTAGATACAACTTCACTCGCTTTGCCATCACACTAAACGAACTGACCCCTGGCTTGAAGGAGAAGTTGCCACCTACAGATTCAAGATTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGACATGGCAAATTCAGAAAAGTTACGGCTAGAGCAACGGCAGCGCCAGGCTAGGAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGCAAAGGATAAGACGAGCGGGACATACCGTTATGTAGGAGGATATTGGGAGGCCCGACAAAGAGGAAACTGGGACTCTTGCCCTGACATCTTTGGCCAAATTCCTTCCGATCATATTTCTGACGAAGGTCAAATTACATTTTAG 2358 0.4686 MHPFCCVSAISDQASPVKPSFADFPMPPLPAAAAATVRSDSAPRHSHKHSLSGSQREQPVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGTMVIGEESMRRITRNRNSYPCQHVRKPFGEIHLKVSTIRESKSDDKRFSVFTGTKRLHLRADTREDRVSWTEALQAVKDMFPRMSNSELMAPLDNVTVSTEKLRLRLMEEGVSEGAIQDSEQIMKSEFAALQSQLVLLKQKHSILIDTLRQLETEKVDLENTVVDESQRQWNDEESSSRLAQEKFSEGTASESEDDNDRNDAAEEETDDDDNAFFDTRDILSSSSFKSNGSDYRMSSFSSDDEGFYALESEDDIDPSIRYVGTNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGRRGNSLMRVLYVAAFAISGYAATEGRVCKPFNPLLGETYEAHYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGMLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGIIQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSDAHLLWKRSKAPKIPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANSEKLRLEQRQRQARKMQESGWKPRWFAKDKTSGTYRYVGGYWEARQRGNWDSCPDIFGQIPSDHISDEGQITF* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1246 785 SUPERFAMILY PH domain-like 72 203 - -
Pvu9g1246 785 Pfam Pleckstrin homology domain 77 193 - -
Pvu9g1246 785 SMART PH_update 70 199 IPR001849 -
Pvu9g1246 785 Gene3D - 489 669 - -
Pvu9g1246 785 Gene3D - 70 199 IPR011993 -
Pvu9g1246 785 Pfam Oxysterol-binding protein 403 757 IPR000648 GO:0008289
Pvu9g1246 785 CDD PH_ORP_plant 72 204 - -
Pvu9g1246 785 SUPERFAMILY Oxysterol-binding protein-like 398 778 IPR037239 -
Pvu9g1246 785 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 775 - -
Pvu9g1246 785 MobiDBLite consensus disorder prediction 285 332 - -
Pvu9g1246 785 MobiDBLite consensus disorder prediction 315 331 - -
Pvu9g1246 785 MobiDBLite consensus disorder prediction 285 299 - -
Pvu9g1246 785 Gene3D - 700 761 - -
Pvu9g1246 785 ProSiteProfiles PH domain profile. 69 197 IPR001849 -
Pvu9g1246 785 Coils Coil 260 287 - -
Pvu9g1246 785 MobiDBLite consensus disorder prediction 38 57 - -
Pvu9g1246 785 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 775 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1246 Pvu-Chr9 18038452 18044347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1246 K20456 - gmx:100137077 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1246 9 18038452 18044347 Pvu9g1246 9 18038452 18044347 ECH