Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1239 ATGGAAGAGCAACAAAAGTCAGGGGAAATAGAAGCTGTGGTAGCCATGGTGCCAAGCCCAGGCATGGGACATTTGATTCCAATGATTGAGTTCGCCAAGAGACTCTGCCGTCACCACAACCTCCGTATCACTTTCTTCATACCCACCTATGCTCCTCCCTCTACGGCCCTAACCACCGTCCTCACCTCCCTCCCACCTCTCATCTCCTACACCTTCCTTCCAACGCTAACACTCTCCGACATTCCACCCAACGCTAAAATGGAGACTATAATCTCTGTCACACTCCTGCGCTCTCTCCCTTCTCTCCGCCACGCCCTCCTCTCTCTGTCCTCCACCCACCGCGTAACCGCTCTACTCCTCGACTTCTTCGGGACCGATGCCTTCGACCTCGCCAGGCAACTAAACGCGCCCCCTTACGTCTTCTTCCCTTCCACCGCCATGCTTTTGTCTTTCGCCTTGCACCTCCCTCGCCTGGACCAAGACGTTCACTTCCGGGACCCCTCCAAGCTTGTCCACATCCCCGGCTGCTTGCCGTTTCTACGAAAGGACTTGGGGGATGCCTTTGAGGACCAGGATAACGATGCCTACAAATGGCTTTTGCACCACTCTAAACGCTACATATTAGCAGAGGGGTTCGTTGAAAATAGCTTCCGTGATCTTGAACCGGACACGTTAGACTTGCTGCTGAAGGAGGAACCGGGTAGGCCACCGGTTTATCCGATTGGACCGCTGGTGAAAGAGGATGATGCTGGAAGCGGTGTGAACATGATCGAACAGTGTTGGTGCTTGAAATGGTTGGATGCGCAGCCGGAAGGCAGTGTGATACTGGTGTGTTTTGGTAGCGGTGGGACCCTGTCCATAGATCAGATGGAGGAACTGGCTTTGGGGTTGGAGATGAGCGAGCAGAGGTTTGTGTGGGTTGTGAAGTGCCCCAATGAGGAAGTTCCTAATGCTTCTTATTTCACCGAGGATACTCATGCCCACCCTTTTGATTTCTTGCCTGAGGGTTTTGTGGAGAGAACAAAAGGAAGAGGCTTGGTGGTGCCGTCTTGGGTCCCACAGGCCCAGGTGCTGAGGCACCCCTCCACTGGAGGGTTTCTCAGCCACTGTGGTTGGAACTCGGTTCTTGAGAGTGTGGTGAATGGGGTGCCCTTGGTGACTTGGCCACTGTATGCTGAGCAGAAGATGAATACCGTTTTGGTAAGTGAAGGTATGAAAGTGGCAGTGAGAGTGGTGATTGGTGAGAATGGGGCGGTGGAAAGAGGAGAAATTGCGAGGGTTGTGAAGATGGTGATGGAAGGTGAGGAAGGGAAGAAACTTCTTCACCGAATGAAGGAACTGAAGGAGGCCGCTGCCGCAGCTCTCAGGGAGGGTGGCTCTTCGTCAACCCAAATTTCTGAATTGGCTCGCAAGTGGAGAGCCCTAACAGAACTTTCAAATTGA 1443 0.5322 MEEQQKSGEIEAVVAMVPSPGMGHLIPMIEFAKRLCRHHNLRITFFIPTYAPPSTALTTVLTSLPPLISYTFLPTLTLSDIPPNAKMETIISVTLLRSLPSLRHALLSLSSTHRVTALLLDFFGTDAFDLARQLNAPPYVFFPSTAMLLSFALHLPRLDQDVHFRDPSKLVHIPGCLPFLRKDLGDAFEDQDNDAYKWLLHHSKRYILAEGFVENSFRDLEPDTLDLLLKEEPGRPPVYPIGPLVKEDDAGSGVNMIEQCWCLKWLDAQPEGSVILVCFGSGGTLSIDQMEELALGLEMSEQRFVWVVKCPNEEVPNASYFTEDTHAHPFDFLPEGFVERTKGRGLVVPSWVPQAQVLRHPSTGGFLSHCGWNSVLESVVNGVPLVTWPLYAEQKMNTVLVSEGMKVAVRVVIGENGAVERGEIARVVKMVMEGEEGKKLLHRMKELKEAAAAALREGGSSSTQISELARKWRALTELSN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1239 480 Coils Coil 437 457 - -
Pvu9g1239 480 Gene3D Glycogen Phosphorylase B; 14 462 - -
Pvu9g1239 480 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 8 474 - -
Pvu9g1239 480 CDD GT1_Gtf-like 14 439 IPR002213 GO:0008194
Pvu9g1239 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 440 IPR002213 GO:0008194
Pvu9g1239 480 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Pvu9g1239 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 470 - -
Pvu9g1239 480 PANTHER GLYCOSYLTRANSFERASE 8 474 - -
Pvu9g1239 480 Gene3D Glycogen Phosphorylase B; 257 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1239 Pvu-Chr9 17872470 17874222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1239 14 474 Glycosyltransferase AT1G01420 51.724 7.86e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1239 K08237 - gmx:100101895 555.444