Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1227 ATGAGGATGGAACACACCAATAACACCATGTCTCGCCCCCTTCTTTTCATGGCATTGCTTTCCATCGTTGTGGCTACAACACATGCACGTGGTCATCATAAGGGAGCGCATGGTCGTCACATGACCGCTCAAAATGTCACTTATGATGGTAAGTCCATGTTCATCAACGGAAGGCGTGAGCTGCTATTTTCTGGTTCCATCCATTACCCTAGAAGCACACAAGATATGTGGCCTGTCCTTCTTGATAATGCAAGACGCGGAGGCATAAATGTCATTCAAACCTACGTGTTTTGGAATGCTCATGAGCCCCAACAAGGACAGTTCAACTTTGCTGGTAATTATGACTTGGTGAAGTTTATTAAGCTCGTTCAAGAACATGGAATGTTTGTCACTCTTAGGGTTGGACCCTTCATCCAAGCTGAGTGGAACCACGGAGGTCTTCCATATTGGCTTAGAGAGGTTCCTGGCATCATTTTCCGCTCTGACAATGAGCCTTACAAGCAACACATGCAAGCATTCGTGACAAAGATTGTACAAATGATGAAAGATGAGAAGCTCTTTGCTCCCCAAGGAGGACCCATCATCTTAGCTCAGATTGAGAACGAGTACAACCACATTCAACTTGCATATGAAGAGAAGGGAGACAGTTACGTCCAGTGGTCTGCAAACATGGCAGTAGCACTGAATGTCGGAGTTCCATGGGTCATGTGCAAGCAAAGAGATGCACCTGATCCAGTGATCAATGCATGCAATGGAAGACATTGCGGTGATACCTTCTCAGGGCCAAACAAACCATACAAACCATCCATATGGACAGAGAACTGGACCGCTCAGTACCGAGTACATGGAGATCCACCATCCCAAAGATCCGCAGAAGATATTGCATTCTCAGTTGCCCGCTTCTTCTCCAAGGGTGGAAACTTGGTTAACTATTATATGTATCACGGTGGAACAAACTTTGGTAGAACCAGTTCTGCATTTACCACAACCCGTTATTACGATGAGGCTCCTCTTGATGAATATGGTCTACAGAGAGAACCAAAATGGAGTCATTTGAGGGATGTGCACAAAGCTGTGCTCCTTTGCAGGAAGGCTATCCTTGGTGGCGATACCAATGTAGAAAAGTTGAACGAATTCCATGAAATTAGAACCTTTGAGAAGCTTGGAACAAACATGTGTGCTGCTTTCATCACTAACAACCACACCATAGATGCAGCCACTATTAACTTTAGAGGCACCAACTACTTTTTGCCTCCACATTCCATTAGCGTCCTCCCTGATTGCAAGACCGTCGTCTACAACACGCAAAGTATTGTTTCACAACATAATTCAAGGAACTACGAGAGGTCGCCCATTGCAAACAATTTCCAATGGGAGATGTTCATCGAGGCTATTCCAACAACCAAAAAAATGGATACGTACCAGAAGCTTCCAGCAGAGCTTTACAGCTTGCTCAAGGACACCACCGATTATGCTTGGTACACCACCAGCTTTGAGTTGAGTCCACAAGACTTGCCAACAAAGCCTGGAGTTATCCCAGTTCTTCGTATTATGAGTCTCGGACACTCAATGGTTGCATTTGTAAACGGAGATCTTGTTGGAACTGCTCATGGAACCCATGAAGAAAAATCTTTTGAGTTCCAGCGACCAGTAGCATTTAAGGTTGGAACCAACTATATTTCCATCTTGGCTAGCACAGTTGGATTACCTGACAGTGGAGCTTACATGGAACATAGATATGCAGGACCCAAGTCCATATCCATCCTTGATCTCAACACCGGAACAATTGACATCAGTAACAATATGTGGGGTCATCGGGTTGGTCTCAAAGGTGAGGGCATGAAAGTTTTCAGTGAGGAAGGATCATTGAAGGCAAAATGGATGCCACTCGCTCCAGTTCCACGCCCTTTAACGTGGTACAGGACTAGATTTGCCACCCCAGAGGGAACAGGTCCAGTTGCCGTAAGGATGACTGGAATGGGCAAAGGATTGATCTGGGTTAATGGTCAAAGCATTGGACGCCACTGGATGACTTTCCTCTCCCCACTTGGAACACCTACTCAATCAGAGTTCCACATCCCAAGAGCTTTCCTCAACCCACAAGACAACTTGCTTGTTATATTTGAAGAGGAGGCAATGAATCCAGGACAGGTTGAGGTATTGAACGTGAACAGAGACACAATTTGCAGTTTCATTGCAGAGAACGAACCTGCCAATGTGAACTCATGGGTGTCTAGGAGAGGAAATTTCCACCCTATTGTGTCAAATATTGGACCCCAAGCTGCACTAGAGTGCAATCCTGGGAAAAAAATTACAGCAGTTGAGTTTGCAAGTTTTGGCAATCCTAGTGGTTACTGTGGAGATTATGTTTTGGGAAGCTGCAATGTTGCTGCTACGAAGCAAATTGTGGAGCAACAATGCTTGGGCAAAGAAACTTGCACAGTTGCATTAGACCGTGCAGTGTTGAACCAAAATGGCGCGGATCCATGCCCAGAAATATTGGTGAAAACCCTTGCAATTCAAGCAAGGTGTTATTAA 2538 0.4515 MRMEHTNNTMSRPLLFMALLSIVVATTHARGHHKGAHGRHMTAQNVTYDGKSMFINGRRELLFSGSIHYPRSTQDMWPVLLDNARRGGINVIQTYVFWNAHEPQQGQFNFAGNYDLVKFIKLVQEHGMFVTLRVGPFIQAEWNHGGLPYWLREVPGIIFRSDNEPYKQHMQAFVTKIVQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYEEKGDSYVQWSANMAVALNVGVPWVMCKQRDAPDPVINACNGRHCGDTFSGPNKPYKPSIWTENWTAQYRVHGDPPSQRSAEDIAFSVARFFSKGGNLVNYYMYHGGTNFGRTSSAFTTTRYYDEAPLDEYGLQREPKWSHLRDVHKAVLLCRKAILGGDTNVEKLNEFHEIRTFEKLGTNMCAAFITNNHTIDAATINFRGTNYFLPPHSISVLPDCKTVVYNTQSIVSQHNSRNYERSPIANNFQWEMFIEAIPTTKKMDTYQKLPAELYSLLKDTTDYAWYTTSFELSPQDLPTKPGVIPVLRIMSLGHSMVAFVNGDLVGTAHGTHEEKSFEFQRPVAFKVGTNYISILASTVGLPDSGAYMEHRYAGPKSISILDLNTGTIDISNNMWGHRVGLKGEGMKVFSEEGSLKAKWMPLAPVPRPLTWYRTRFATPEGTGPVAVRMTGMGKGLIWVNGQSIGRHWMTFLSPLGTPTQSEFHIPRAFLNPQDNLLVIFEEEAMNPGQVEVLNVNRDTICSFIAENEPANVNSWVSRRGNFHPIVSNIGPQAALECNPGKKITAVEFASFGNPSGYCGDYVLGSCNVAATKQIVEQQCLGKETCTVALDRAVLNQNGADPCPEILVKTLAIQARCY* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1227 845 SUPERFAMILY Galactose-binding domain-like 601 749 IPR008979 -
Pvu9g1227 845 Gene3D Glycosidases 42 361 - -
Pvu9g1227 845 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 191 203 IPR019801 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 56 73 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 77 95 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 132 151 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 189 204 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 270 285 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 307 322 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 326 342 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 635 649 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 PRINTS Glycosyl hydrolase family 35 signature 662 678 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 Gene3D - 611 731 - -
Pvu9g1227 845 Gene3D - 407 582 - -
Pvu9g1227 845 PANTHER BETA-GALACTOSIDASE RELATED 15 834 IPR001944 GO:0004553|GO:0005975
Pvu9g1227 845 Pfam Beta-sandwich domain in beta galactosidase 367 437 IPR041392 -
Pvu9g1227 845 SUPERFAMILY (Trans)glycosidases 43 362 IPR017853 -
Pvu9g1227 845 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 15 834 - -
Pvu9g1227 845 SUPERFAMILY Galactose-binding domain-like 422 582 IPR008979 -
Pvu9g1227 845 Pfam Galactose binding lectin domain 763 844 IPR000922 GO:0030246
Pvu9g1227 845 Gene3D - 754 845 IPR043159 -
Pvu9g1227 845 Pfam Glycosyl hydrolases family 35 52 358 IPR031330 -
Pvu9g1227 845 ProSiteProfiles SUEL-type lectin domain profile. 755 845 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1227 Pvu-Chr9 17726815 17731093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1227 46 844 Glycoside Hydrolase AT2G16730 57.731 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1227 - - ccaj:109817195 1488.4