Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1218 ATGGCTGTTTCGGCTATCACTGGAGCGAGGATAACCCTAGGGAGGCCTCTTTCCTCTCCCTCACTCACACGCAGAACAACTCCTCCCTCGCTCGTTATGGCCGTCTCCATTGACCACAAGACCGACAAAAAACTCACTCTTACCAAGTCCGAGGAGGCTTTCGCCGCTGCCAAGGAGTTGTTGCCTGGAGGTGTGAACTCCCCAGTTCGTGCCTTCAAATCGGTGGGTGGCCAACCAATTGTGATCGATTCGGTGAAAGGGTCTCGCATGTGGGACATCGATGGAAATGAGTACATTGACTACGTCGGTTCTTGGGGTCCTGCTATTATTGGTCACGCTGATGATCAGGTGCTTGCAGCTCTAGGTGAAACCATGAAGAAAGGAACAAGCTTTGGCGCACCCTGTTTGTTGGAAAACACTTTGGCTAAGCTGGTTATCGATGCCGTCCCTAGCATTGAAATGGTTCGGTTTGTCAATTCTGGCACAGAAGCTTGCATGGGTGCTCTCCGTCTTGCACGTGCTTATACAGGACAGAATAAGATCATCAAGTTTGAGGGGTGTTATCATGGCCATGCAGATACTTTTCTTGTTAAGGCTGGTAGTGGAGTTGCCACCTTAGGACTTCCTGATTCCCCTGGTATCCCCAAAGCTGCCACAAATGAAACCCTTACAGCCCCCTACAATGACATATTGGCCGTTGAAGAGCTCTTTGAGAATAACAAAGGACAAATTGCCGCCGTTTTCCTGGAACCTGTTGTTGGAAACGCTGGTTTCATTGTTCCTACACTTGAATTTCTTAATTTCTTGCGCAAAATCACCAAAGAGAACAATACACTTCTTGTGTTTGATGAAGTTATGACCGGATTTCGATTGTCATATGGAGGTGCTCAAGAGTATTTTGGCATAACTCCTGATTTAACAACTCTAGGAAAGATCATTGGTGGAGGTCTGCCCGTGGGCGCTTATGGTGGGAGGAGGGATATTATGGAGATGGTGGCACCAGCTGGCCCAATGTACCAGGCTGGGACCTTGAGTGGGAACCCTTTGGCCATGACTGCAGGCATACACACCCTGCAGCGTATTAAGGAGCCAGGAACTTACGAGTACTTGGACAAAGTCACAGGTGAGCTTGTTCAGGGCATTATTGAAGCTGGGAAGAGGGCAGGTCATGCAATATGTGGTGGGCATATAAGTGGGATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGTATAATTTTGAAGATGCTAAGAAGAGTGATACTGCCAAGTTTGCTAGATTCTTTTGGGGAATGCTGGCAGAAGGTGTCTATTTGGCACCTTCACAGTTTGAGGCTGGCTTCACCAGCTTGGCACATACTTCTGATGACATTAAAAAGACAATAGCCGCAGCTGAGAAAGTTTTCAGAGAGATCTGA 1416 0.4781 MAVSAITGARITLGRPLSSPSLTRRTTPPSLVMAVSIDHKTDKKLTLTKSEEAFAAAKELLPGGVNSPVRAFKSVGGQPIVIDSVKGSRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENTLAKLVIDAVPSIEMVRFVNSGTEACMGALRLARAYTGQNKIIKFEGCYHGHADTFLVKAGSGVATLGLPDSPGIPKAATNETLTAPYNDILAVEELFENNKGQIAAVFLEPVVGNAGFIVPTLEFLNFLRKITKENNTLLVFDEVMTGFRLSYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLQRIKEPGTYEYLDKVTGELVQGIIEAGKRAGHAICGGHISGMFGFFFTEGPVYNFEDAKKSDTAKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1218 471 Gene3D - 115 363 IPR015421 GO:0003824
Pvu9g1218 471 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 20 469 - -
Pvu9g1218 471 Gene3D Aspartate Aminotransferase, domain 1 52 464 IPR015422 GO:0003824
Pvu9g1218 471 SUPERFAMILY PLP-dependent transferases 47 470 IPR015424 -
Pvu9g1218 471 PANTHER BNAA09G06670D PROTEIN 20 469 - -
Pvu9g1218 471 CDD OAT_like 54 468 IPR005814 GO:0008483|GO:0030170
Pvu9g1218 471 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 49 470 IPR004639 GO:0033014|GO:0042286
Pvu9g1218 471 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 49 471 IPR004639 GO:0033014|GO:0042286
Pvu9g1218 471 Pfam Aminotransferase class-III 79 388 IPR005814 GO:0008483|GO:0030170
Pvu9g1218 471 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 280 316 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1218 Pvu-Chr9 17624511 17626765 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1218 K01845 - gmx:547795 837.41