Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1210 ATGACGATTCATTCGATAGTGATACAGAAGCTGCTGAGCACGAATGCGCAAGTGGGTCGACGAGTTGCTGCTCACCATTTCAAGGGCTACACCTATGGCTTCCGCAACAAGATGGCCATCATCGACTCCGACAAAACCCTCATTTGCATGCGCAGCGCATTCAATTTCGTCGCCTCCCTCGCCCGCCACAACGCCCGCTTCATGTTCATCAACACCAACCCTCTCTTCGACGACATCTTCAACCTCATGACCAAGAAGGTTGGCTCCTACTCCATCTCCACCAGCTCCCTCTGGCGCACCGGCGGCTTCCTCACCAACAGTTACAGCCCCAAGAAGTTCCGCTCCCGCAACAAGAAACTCGTCTTCGGCCCCACCCAGCCCCCCGATTGCATCGTCATTGTCGACACCGACCGCAAGTCTTCCGTCATCAACGAGGCTTTCAAGCTTCAAATTCCCGTTGTTGCATTGGTCGACTCCGCCATGCCCCTCGATGTCTACAGCCGCATTGCTTATCCTGTTCCCGCCAACGATTCTGTTCAATTCGTTTATCTGTTCTGTAATTTGATTACCAAAACACTGCTTCATGAGAAGAGCAAGTCTGCTGCTGCCGCTAATCTCAACATTGATTTTCGAGATGAAGCTCCGCGCAAGGGCAAGAGCGATTTGGATAAGGTCGGCATAACCGTAGTTCCCTATTCTAGTTTAGCTCCTTCATCCGAAGATACAGAGGAAACTAAGAAGCTTTTGGACAAACTTGTTGTTTTGAAGTTTAATGGTGCCCAAGGAGGAAATATGGGCTTTGAGGGTCCCAAATCTGCAATTAATATTAGTGATGGACAGACATTTCTGGACTTGATCATTAACCAGATTGAGATGCTCAACTCCAAGTATGGATGCAGGGTTCCGTTGCTTCTTTTCAACAAAAATGACATTCATGATAGTTCTCTAAAGGTTTTGGAGAAGTATTCAAAATCAAGTGTTCAAGTGCAGACATTGAAGCAGGGTGAAGGTGGAGAATTGAAATTATCGAAGGAAGATTCCAGTGAGGCGGAAGTGCATCCATTGGATGATGTTGATGTGTTGCATTCACTCATGACTGGTGGAACCCTTGATTCATTATTGTCACAGGGTAAAGAGTATATCCTAGTGTTGAAGTCAGACAATGTGGCAACAATTGTTGATACTAATATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTGACACCAAACCATAACTTATTCTTAACCGCAATGAAAGTTAAGCTTCGTGAGATTGCTCGAAACCAAGATAAAAATTTGAAGAACAATTTCAAACTCATTGATACAACAAATATGTGGGTAAGCTTAAGAGCCATCAAGAGATTTGTTGATGCTGATGAACTAAAGCAGAAGAAGCCCTCAGTTTTGAAGTTCTTTGATAATGTAATTGGTGTCTCTGTGCCTGAGTCTCGGTTTCTTCCATTGGATGCAACGTCAGATCTATTTCTTCTTCAGTCAGATCTATACACTTGTAGAGAAGGTGTTTTAACTCGCAATCCAGCCAGAACTAACCAGTTAAATCCCATCATAGACTTGGGACCTGAATTTGAAAAGGTTGGTGACTTCCAAAGTCGTTTCAAATCCATTCCAAGTATCATTGAGCTGGATAGTTTGAGGGTGAGAGGTGATGTGTGGTTTGGAGCTGATATTACTTTGAAGGGGCAAGTGACTATTGCTGCAAAACCTGGCTTGAAATTGGAAATTCCAGATGGGGTGACGATTGAGAACAAGGAGATCAACGACCCTGCAGATATCTAA 1812 0.4421 MTIHSIVIQKLLSTNAQVGRRVAAHHFKGYTYGFRNKMAIIDSDKTLICMRSAFNFVASLARHNARFMFINTNPLFDDIFNLMTKKVGSYSISTSSLWRTGGFLTNSYSPKKFRSRNKKLVFGPTQPPDCIVIVDTDRKSSVINEAFKLQIPVVALVDSAMPLDVYSRIAYPVPANDSVQFVYLFCNLITKTLLHEKSKSAAAANLNIDFRDEAPRKGKSDLDKVGITVVPYSSLAPSSEDTEETKKLLDKLVVLKFNGAQGGNMGFEGPKSAINISDGQTFLDLIINQIEMLNSKYGCRVPLLLFNKNDIHDSSLKVLEKYSKSSVQVQTLKQGEGGELKLSKEDSSEAEVHPLDDVDVLHSLMTGGTLDSLLSQGKEYILVLKSDNVATIVDTNILNHLMINDIEYCMEVTPNHNLFLTAMKVKLREIARNQDKNLKNNFKLIDTTNMWVSLRAIKRFVDADELKQKKPSVLKFFDNVIGVSVPESRFLPLDATSDLFLLQSDLYTCREGVLTRNPARTNQLNPIIDLGPEFEKVGDFQSRFKSIPSIIELDSLRVRGDVWFGADITLKGQVTIAAKPGLKLEIPDGVTIENKEINDPADI* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1210 603 Gene3D Hexapeptide repeat proteins 494 603 - -
Pvu9g1210 603 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 PRINTS Ribosomal protein S2 signature 169 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 SUPERFAMILY Ribosomal protein S2 8 206 IPR023591 -
Pvu9g1210 603 CDD RPS2 11 194 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 Pfam UTP--glucose-1-phosphate uridylyltransferase 229 571 IPR002618 GO:0070569
Pvu9g1210 603 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 603 - -
Pvu9g1210 603 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 578 IPR029044 -
Pvu9g1210 603 Gene3D - 2 196 - -
Pvu9g1210 603 PANTHER - 1 603 IPR016267 GO:0003983|GO:0006011
Pvu9g1210 603 Pfam Ribosomal protein S2 11 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 Pfam Ribosomal protein S2 125 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pvu9g1210 603 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 197 493 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1210 Pvu-Chr9 17567058 17576084 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1210 K00963 - gmx:100812583 968.378